Panicum virgatum (switchgrass): 120710050
Help
Entry
120710050 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 25-like
KO
K12189
ESCRT-II complex subunit VPS25
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120710050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120710050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120710050
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120710050
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120710050
Exosomal proteins of colorectal cancer cells
120710050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
MMM1
WHD_GTF3C1
GntR
Motif
Other DBs
NCBI-GeneID:
120710050
NCBI-ProteinID:
XP_039851624
LinkDB
All DBs
Position
5K:complement(42394272..42397503)
Genome browser
AA seq
177 aa
AA seq
DB search
MQRLGDFRLPPFFNYPPYFTLQPVRETREKQVQLWKDLILDYCRSHKIHTISLEEDFPLF
SNPKIERSLSHEAKEVFLAALVSEGRAEWMDKGHKKCLILWLRIQDWANFILNFVKDNGL
EVMTIEEIRSGIDTRGTELEGIDRGVLMRALRQLEQKGKAAIFKGTSADDEGVKFSV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctaggggatttcaggctgcctcccttcttcaactacccgccttacttcact
ttgcagcctgtgcgcgaaacgcgggaaaagcaagtccagttatggaaagatctgatactt
gattactgtagaagtcacaagatacatacaatatccctggaagaagatttccccttgttc
tccaatccaaagatcgagagatctcttagccatgaagcgaaggaagtgttccttgcagct
cttgttagtgaaggtcgtgcagaatggatggacaaaggtcacaagaaatgcctcattctt
tggctaagaatacaggattgggccaatttcatattaaattttgtaaaggataatggattg
gaagtaatgaccatcgaagaaatacgctctggaatcgatactcgtggaactgaacttgag
ggaatcgatcgtggtgttctcatgcgggctctgaggcaattggaacagaaaggcaaagca
gctatcttcaaaggcacttcggccgatgacgaaggcgtgaagttttctgtgtaa
DBGET
integrated database retrieval system
