Panicum virgatum (switchgrass): 120710060
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Entry
120710060 CDS
T07260
Name
(RefSeq) acidic endochitinase Pun g 14, amyloplastic-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120710060
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120710060
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Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
120710060
NCBI-ProteinID:
XP_039851637
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Position
5K:42549547..42550661
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AA seq
297 aa
AA seq
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MATNLKWPSVLALLLVAGMVGIASAGNIAVYWGQNVNEGTLADACSSGSYAYVIISFLST
FGSGQAPVLNLAGHCNPGECAGLASDIQSCKSQGVRVLLSLGGAGGNYGLSSTDDANSVA
DYLWDNFLGGTGSTSRPLGAVALDGIDLDIENGNPAHYDELASALKAKDGGVLLTAAPQC
PYPDASLGPALQTGLFDAVWVQFYNNPGCAYAGGDDANLVAAWRTWTGGVRAGSFYLGLP
ASEEAAGSGYIPPGDLTGTVLPAVQGVGGGYGGIMLWSRYYDVLKNPNYSDQVKGSV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaatctcaagtggccctctgttctggccctcctcctcgtcgccggcatggtt
ggcatcgccagtgccggcaacatcgccgtgtactggggccagaacgtcaacgagggcacc
ctggccgacgcctgcagctccggcagctacgcctacgtcatcatctcgttcctgagcacc
ttcggcagcggacaggccccggtcctcaacctcgccgggcactgtaaccccggcgagtgc
gccggcctcgcctccgacatccagtcgtgcaagtcgcagggcgtcagggtgctcctctcc
ctcggcggcgccggcggcaactacggcctctcctccaccgacgacgccaacagcgtggcc
gactacctgtgggacaacttcctgggcggcacgggctcgacgtcccggccgctgggcgcc
gtcgcgctggacggcatcgacctcgacatcgagaacggcaacccggcgcattacgatgag
ctggcgagcgcgctcaaggccaaggacggcggcgtgctgctgacggcggcgccgcagtgc
ccctacccggacgcgtcgctggggccggcgctgcagacggggctgtttgacgcggtgtgg
gtgcagttctacaacaaccccgggtgcgcgtacgccggcggggacgacgccaacctggtg
gccgcgtggcgcacgtggaccggcggcgtcagggccgggagcttctacctcggcctgccg
gcctccgaagaggccgccggcagcgggtacatcccgcccggcgacctgacggggacggtg
ctccccgccgtccagggcgtcggcggcggctacggcgggatcatgctgtggagccgctac
tacgacgtgctgaaaaacccaaactacagcgaccaggtcaagggcagcgtctga
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