KEGG   Panicum virgatum (switchgrass): 120710073
Entry
120710073         CDS       T07260                                 
Name
(RefSeq) F-box/LRR-repeat protein 20-like
  KO
K10268  F-box and leucine-rich repeat protein 2/20
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120710073
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120710073
SSDB
Motif
Pfam: LRR_6 LRR_FBXL15 LRR_4 LRR_SKP2 LRR_RPS2 LRR_At1g61320_AtMIF1 LRR_At5g56370 LRR_14 F-box_5 F-box DUF8380 F-box-like
Other DBs
NCBI-GeneID: 120710073
NCBI-ProteinID: XP_039851657
LinkDB
Position
1K:complement(43052482..43055214)
AA seq 417 aa
MSAPPSGGGGALINEVLTDDELRAVLSRLGPEAERDAFGLVCRRWLRIQSSERRRLRARA
GPDMLRRLAARFPGALELDLSQSPSRSFYPGVIDDDLDVIASSFRNLRVLALQNCKGISD
VGIAKLGDGLPFLQSVDVSRCIKLSDKGLKAVALGCQKLRQLHITGCRLITDNLLLSLSK
SCLQLENLGAAGCNSITDTGISALADGCHHIKFLDISKCNKVGDPGVCKIAEVSSSHLVS
IKLLDCSKVGDKSIYSLAKCCSNLETLVIGGCRNISDASMQALALACSSSLRSLRMDWCL
KITDTSLRSLLSNCELLVAIDVGCCDQITDVAFQDGEGNGFRSELKVLKISSCVRLTVAG
VSSVIKSFKALEYLDIRSCPQVTRDSCEQAGIQFPSACKVNFYGSLLESDPSAERFF
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtcggcgccaccgtcgggcggcggcggcgccctcatcaacgaggtgctcaccgacgac
gagctccgcgcggtgctctcccgtctggggcccgaggcggagcgcgacgccttcgggctc
gtgtgccgccgatggctccggatccagagctccgagcggcggcgcctgcgcgcgcgcgcc
ggcccggacatgctgcgccgcctcgccgcgcgcttcccgggagccctcgagctcgacctc
tcccagtccccctcccgctccttctaccccggggtcatcgacgacgacctcgacgtcatc
gccagcagcttccgcaacctgcgtgtcctcgcgctgcagaattgcaaaggtatctctgat
gttggaattgccaaattgggagatggactgccatttctgcagtctgttgatgtttctcgc
tgcataaagctgagtgataaaggtttgaaggcagttgcactggggtgccagaaattgagg
cagctgcatatcacaggatgcagattaataactgataatttattgctttctctatcaaag
agctgtctacaattggaaaatcttggagcagcaggatgtaacagcataacagatactggt
atatctgctctagctgatggctgtcatcatataaaattccttgacattagtaaatgtaat
aaagttggtgatcctggagtctgtaaaattgctgaggtttcttcatcacacttggtgtca
ataaagctattggactgcagcaaggtgggagataagtccatctattcattagctaagtgc
tgcagtaacctagagactcttgtcattggtggatgtcggaacattagcgatgcatccatg
caagctcttgctcttgcctgctccagcagcttaaggagcctgagaatggactggtgcctg
aaaataacagacacgtcattgcgaagtctgctgtctaactgtgaacttcttgtggcgatt
gatgttggatgctgtgaccagataaccgacgttgcatttcaggacggggaaggaaatggg
tttcggtctgaactgaaagttttgaagatcagcagctgtgttcggctcacagttgcaggg
gtcagcagtgtgattaaatccttcaaggctcttgagtacctggacattcggtcttgtcct
caggttacaagggacagctgcgagcaagctggaatacagtttcctagtgcatgtaaggtg
aatttctatggaagcttgctggagtctgatccatctgctgagaggttcttctaa

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