Panicum virgatum (switchgrass): 120710080
Help
Entry
120710080 CDS
T07260
Name
(RefSeq) aspartic proteinase oryzasin-1-like
KO
K08245
phytepsin [EC:
3.4.23.40
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120710080
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.40 phytepsin
120710080
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120710080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Asp
SapB_1
TAXi_N
SapB_2
Asp_protease_2
TAXi_C
Motif
Other DBs
NCBI-GeneID:
120710080
NCBI-ProteinID:
XP_039851663
LinkDB
All DBs
Position
5K:complement(42815270..42820271)
Genome browser
AA seq
511 aa
AA seq
DB search
MATGRVALLLLLLLTTALLLVLLAPPAEGLVRIPLKKLPADSNGRLHAERRRGFLGSSSD
DAAALNKAEAEEEGDIVALKNYLNAQYYGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYA
SIACYFHERYKAGRSNSYKKNGKRASIRYGTGAISGYFSLDSVKIGDIVVKNQDFIEATR
ETSVTFMVGKFDGILGLGFKEISVGAAVPVWYNMVKQGLVDDPVFSFWFNRHADEGQGGE
IVFGGIDPNHYKGNHTYVPVTRKGYWQFGMGDVLIGGKSTGFCASGCAAIADSGTSLLTG
PTAIITQINEKIGAAGVVSQECKAVVSQYGQRIIDQLIAKTQPAKICSSVGLCTFDGAHG
VSTGIWSVVDDGAGESNGLFSEAMCNACETAVVWIQNQLAQNQTQDVVLQYINQLCEKLP
SPMGESSVDCSRVASMPDIAFTIGGRKFTLKPEQYILKVGEGHAAQCISGFTAMDIPPPR
GPLWILGDIFMGAYHTVFDYGNLKVGFAEAA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggccgcgtcgcgctgctcctcctcctcctcctcaccaccgcgctgctgctg
gtcctcctcgccccgccggcagagggcctggtccgcatcccgctgaagaagctgccggcg
gacagcaacggccgcctccatgccgagcggcgccgcggcttcctcggcagcagcagcgat
gacgccgccgcgttgaacaaggccgaggccgaggaggagggcgacatcgtggcgctgaag
aactacctcaacgcgcagtactacggcgagatcggcatcggcacgccgccgcagacgttc
accgtcatcttcgacaccggcagctccaacctctgggtgccctcctccaagtgctacgca
tcgatcgcttgctatttccacgagaggtacaaggccggccgatcgaactcttataagaag
aatggaaaacgtgcttctatacgctatggtactggtgcaatttctggctattttagcctg
gacagtgtgaaaatcggtgatattgttgtgaaaaatcaggatttcattgaagctacaagg
gagactagtgttactttcatggttggaaaattcgacggtattcttgggcttggatttaag
gaaatctccgttggagctgctgtacctgtctggtacaacatggttaaacagggtcttgtt
gatgatcctgttttctcattctggttcaaccgacatgctgatgaagggcagggaggtgaa
attgtgtttggaggaattgatcctaatcactacaagggaaatcatacatatgtccctgtc
actaggaagggatactggcagtttggtatgggtgatgtcctgattggaggaaagtccaca
ggattctgtgcttctggctgtgcagcaatagcagattctggaacttcattgcttactggt
cccacagccataattactcagataaatgaaaagattggtgctgctggggtagtcagccaa
gaatgcaaggcagttgtttctcagtatgggcaacggatcatagatcagttgatagccaag
acacagccggcaaagatatgctcttcagttggtctatgtacttttgatggagctcatggt
gttagtactggtatttggagtgtggtagatgatggagctggggaatcaaatggtctcttc
agtgaagctatgtgcaatgcctgtgaaacggctgttgtatggatacaaaaccagcttgca
cagaaccaaactcaggatgtggtgttgcagtacattaatcaactgtgtgaaaagcttcct
agtcctatgggagaatcctcagtggactgcagcagagttgcatccatgcctgacattgcc
tttaccatcgggggtagaaagttcacactcaaaccagaacaatatatcctgaaggttggt
gaaggacatgctgctcagtgcatcagtggtttcacagctatggacattcctcctcctcgt
ggccctctatggatattgggcgatatattcatgggagcctaccacaccgtctttgactac
ggcaacctgaaggttggcttcgcagaggcagcataa
DBGET
integrated database retrieval system
