Panicum virgatum (switchgrass): 120710088
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Entry
120710088 CDS
T07260
Name
(RefSeq) carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X1
KO
K03797
carboxyl-terminal processing protease [EC:
3.4.21.102
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120710088
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.102 C-terminal processing peptidase
120710088
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
120710088
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GFIT
Motif
Pfam:
Peptidase_S41
PDZ_6
PDZ
PDZ_2
PDZ_Tricorn
JmjC
OxoGdeHyase_C
Motif
Other DBs
NCBI-GeneID:
120710088
NCBI-ProteinID:
XP_039851675
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Position
5K:42836041..42841677
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AA seq
457 aa
AA seq
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MRPLSSAPPAPHARASPGPGRGPRPRPPPCALPFPDALRAAAAAAAVSLSLLTGDAVGAV
AAQPVEVCRDGAAAVAEEVRGEAVTNEQLVEEAWEVVNESFLPDAGSRPWSPEMWMQRKQ
DILQGTIKSRARAHDIIQKMLASLGDPYTRFLSPSEFSKMSKYDMTGIGLNLREIPDGNG
SFKLMVLGLLLDGPAYSAGVRQGDELLSVNGIDVRGKSAFDTSSMLQGPKETFVTIKVKH
GDCGPVESLKVQRQLVARTPVFYHLEKKENDDSSVGYIRIKEFNAVAKKDLVSALKHLQN
SGATYFVLDLRDNLGGLVQAGIETAKLFLNKGDTVIYTAGRDHQVQNTIVAESGPMISTP
LMLLVNDRTASASEIVASALHDNCKAVLVGEKTFGKGLIQSVFELHDGSGIVVTIGKYVT
PNHKDINGNGIEPDYNRLPDFNEARDYLSRCRFKKLS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggccactctcctccgcgccgccggcgccgcacgcgcgagcgagccccgggcccggc
cgcgggcccaggcccaggccgccgccgtgcgcgctgccgtttccagacgccctccgcgcg
gcggcggcggcggccgccgtctccctctcgctcctcaccggcgacgccgtgggcgcggtt
gcggcgcagcccgtcgaggtgtgccgggacggggccgcggcggtggcggaggaggtgagg
ggcgaggcggtgacgaacgagcagctcgtggaggaggcgtgggaggtggtcaacgagagc
ttcctccccgacgccgggagccgcccgtggtcgccggagatgtggatgcaaaggaagcag
gatattctccaaggcacaattaaatcccgtgctagagcccatgatatcattcagaaaatg
ctagcgagcctcggtgatccgtatacaaggtttctatctccatcagaattctcaaagatg
tcaaaatatgacatgaccgggattggattaaacttgagggaaattcctgatgggaatggc
tccttcaagttgatggtattagggctgctattagatgggcctgcttactctgctggtgtt
agacagggtgatgagcttttatcagtcaatggcattgatgtaaggggtaaatctgcattt
gatacttcatccatgctgcaaggtccaaaggagacatttgttactattaaagtgaagcat
ggtgattgtggtcctgttgagtcactgaaggtgcagagacaactggttgctcgaactcca
gttttctatcatttggagaaaaaagagaacgatgattcatctgttggatatattcgcatt
aaagagttcaatgcagtggccaagaaagatttggttagtgcgctaaaacatctacagaat
tcaggtgccacctatttcgttctggatttgagggacaaccttggtgggctagttcaagct
ggaatagagactgcaaagctctttctcaataaaggagacacggtcatttatactgctggc
cgggatcatcaagtccagaacacaattgttgctgaaagtggacctatgatttctactccc
cttatgttactggtgaatgataggacagcaagtgccagtgaaatagttgcttcagcactt
catgacaattgcaaagctgttcttgttggcgaaaagacttttggcaagggcttaatccaa
tctgtttttgaacttcatgacggttctggtattgtcgtcacgattggcaagtatgttaca
ccaaaccacaaggacatcaatggaaatggaatagaaccggattacaatcgtcttcctgat
ttcaatgaagcgagagattacctttcacgttgccgatttaaaaaattaagctga
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