Panicum virgatum (switchgrass): 120710093
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Entry
120710093 CDS
T07260
Name
(RefSeq) ribokinase-like
KO
K00852
ribokinase [EC:
2.7.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120710093
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.15 ribokinase
120710093
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Motif
Pfam:
PfkB
Phos_pyr_kin
Carb_kinase
Motif
Other DBs
NCBI-GeneID:
120710093
NCBI-ProteinID:
XP_039851687
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Position
5K:42924443..42933123
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AA seq
430 aa
AA seq
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MLTPLVSQLQPPAPASPTVFFSHTIPATASSSSLPNAVAVSCEADAADFFYCRCWHAADL
GRAGKLSLARVRLPPAGPTPATAHFSSSNPRPAHLTFSSKRAPASRYAAAAAANEPPAPI
VVVGSANADIYVEVDRLPLAGETVAARAGRSLPGGKGANQAACGGRLALGPTYLVARVGD
DANGRLLEGALADAGGVRTDRVARAPDAPSGHAVVMLMPDGQNSIIIVGGANMQGWAAGI
GAEDLELIQKAGVLLLQREIPDWVNTQAAQAAKSAGVPVIMDAGGMDAPVPQDLLSLVDI
FSPNETELARLTGMPTETFEQISQAAGECHKMGVKEVLVKLGSQGSALFVEGEKPVRQPI
IPATEVIDTTGAGDTFTSAFAVALVEGKSKEECMRFAAAAASLCVRVKGAIPSMPDRKSV
MKLLESAQVE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcactccgttggttagccagctccagccaccagctccagccagcccaacagtattt
ttctctcacaccattccagctacagcctccagctccagcctgccgaacgcagtggctgtt
tcttgcgaggcagatgctgctgattttttttattgcagatgctggcatgctgctgatctt
gggcgtgcggggaaactgagtttggcacgcgtgcgtcttcctcccgccggcccaacgccg
gccaccgcccacttctcgagctccaaccccagacccgcccacctgaccttctcctcgaag
cgcgcccccgcctctcgctacgccgccgccgccgccgccaatgagccgccggcccccatc
gtcgtcgtgggctcggccaacgccgacatctacgtcgaggtcgaccgcctcccgctcgcc
ggcgagaccgtggcggcccgcgcggggcgcagccttccgggcgggaagggcgccaaccag
gcggcctgcggcgggcggctcgcgctgggccccacctacctggtggcgcgcgtgggggac
gacgcaaacgggcggctcctcgagggcgcgctggccgacgccggcggcgtccgcaccgac
cgcgttgcgcgcgcgcccgacgcgccctcggggcacgccgtcgtcatgctcatgcccgac
gggcagaactccatcatcatcgtcggcggagctaacatgcagggctgggccgctgggatc
ggcgcggaggacctggaattgatccaaaaggctggggtgctgctgctgcagagggagata
cccgattgggtcaacacgcaggctgcccaggctgcaaaaagtgcaggcgtgcctgttatc
atggacgctggtggaatggatgctcctgtacctcaagatctactcagtctagtggatatt
tttagtccaaatgaaacagaactagcacggttgactgggatgcctactgagacatttgag
cagatcagccaggctgcaggagaatgccataaaatgggtgtgaaagaagtactagttaaa
cttggatcgcagggatctgctttgtttgttgagggagagaagccagtcagacagccgatt
attcctgccacagaagttattgataccacgggggctggtgacactttcacctcagctttt
gctgtagctctggttgaggggaagtctaaggaggagtgcatgagatttgctgccgctgct
gcctccttgtgtgttcgagtgaagggtgctatacccagcatgcctgacagaaagtcagtg
atgaagcttctggaatctgcgcaagtcgagtag
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