Panicum virgatum (switchgrass): 120710094
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Entry
120710094 CDS
T07260
Name
(RefSeq) probable WRKY transcription factor 48
KO
K28581
WRKY transcription factor group IIc
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120710094
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
WRKY
120710094
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Gene cluster
GFIT
Motif
Pfam:
WRKY
Motif
Other DBs
NCBI-GeneID:
120710094
NCBI-ProteinID:
XP_039851688
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Position
5K:complement(42937865..42940926)
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AA seq
403 aa
AA seq
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MSSGEFHFHDELASLFAQRPAAPGLGEMMAQQQQAPASWFADYLHAGAGAPGMGMDYDLL
CRALDLPVPGDDVVKRELLVVDTGGGGGGFGAPTPTPSGGGTAPVTPNTTSSMSSSSSEA
AGGGGGGGGGGGGGGFGAGEEDSLKKEEGEEEGEESKELGGKGEDDADKSKKGAAAAGKA
KGKGEKRQRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCLVKKR
VERSYQDPAVVITTYEGKHTHPIPATLRGSTHLLAAQLHHHYHAGGGGGGHHLGGAFPPL
PQMGAPFGRSSSGVGGGSVIDVLGLLPPRGAHSNHTVPPAIGLASSHGMSGPTSTVAGAA
TTTASSSPPSLQMQHFMAQDFGLLQDMLPPPPFVHSNGGNIQP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggagagttccacttccacgacgagctggcgtcgctgttcgcgcagcggccg
gcggcgccgggcctgggggagatgatggcgcagcagcagcaggcgccggcatcgtggttc
gcggactacctgcacgcgggcgcgggcgcgccgggcatggggatggactacgacctgctg
tgccgcgcgctggacctgccggtgcccggggacgacgtcgtcaagagggagctgctggtg
gtggacacgggcggcggcgggggaggcttcggcgcgcccacgcccacgcccagcgggggc
ggcacggcgccggtcacgcccaacaccacgtcgtcgatgtcgtcctcctcgagcgaggcc
gcgggcggcggcggcggcggcggaggaggaggaggaggcggcggcttcggcgccggggag
gaggactcgctcaagaaggaggaaggggaagaagaaggggaggagagcaaggaactcggc
ggcaagggggaggacgacgctgacaagagcaagaaaggggcggcggcggcggggaaggcc
aagggcaagggcgagaagcggcagcggcagccgcggttcgcgttcatgaccaagagcgag
gtcgaccacctcgaggacggctaccggtggcgcaagtacggccagaaggccgtcaagaac
agcccataccccaggagctactaccggtgcacgacgcagaagtgcctggtgaagaagcgg
gtggagcggtcgtaccaggacccggcggtggtgatcaccacgtacgagggcaagcacacg
caccccatcccggccacgctccgcggcagcacccacctcctcgccgcgcagctgcaccac
cactaccacgccggcggcggcggcggcggacaccacctcggcggcgccttcccgccgctg
ccgcagatgggcgcgccgttcgggcggtcgtcgtccggtgtcggcggcggcagcgtcatc
gacgtgctcggccttctgccgccccgcggcgcccacagcaaccacaccgtgccgccggcg
ataggcctcgcgtcgtcccacggcatgagcggtccgacgagcaccgtcgcgggcgcggcc
accaccaccgcctcgtcgtctcccccgtcgctccagatgcagcacttcatggcgcaggac
ttcgggctcctgcaggacatgctgccgccgccgcccttcgtccacagcaacggcggcaac
atccagccctga
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