Panicum virgatum (switchgrass): 120710353
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Entry
120710353 CDS
T07260
Name
(RefSeq) calreticulin-3-like
KO
K08057
calreticulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120710353
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120710353
04148 Efferocytosis
120710353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120710353
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120710353
Chaperones and folding catalysts [BR:
pvir03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120710353
Lectins [BR:
pvir04091
]
L-type lectins
120710353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
120710353
NCBI-ProteinID:
XP_039851918
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All DBs
Position
5K:57625843..57629952
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AA seq
414 aa
AA seq
DB search
MGPRRRRGGLRGCLLVLSSLLLLASGEVFFEERFEDGWESRWVESDWKRSEGKAGRFKHT
AGRYSGDPDDKGIQTTMDARHFAISAKFPQFSNKNRTLVVQYSIKFEQDIECGGGYIKLM
SGYVNQKKFSGDTPYSLMFGPDICGTDTKKLHLILSYQGQNYPIKKDLECETDKLTHMYT
FILRPDASYSLLVDNRERESGSMYTDWDILPPRKIKGVNAKRPKDWDDREYIDDPDDVKP
EGYDSIPKQIPDPKDKKPDTWDDDDDGIWKPRMISNPAYKGPWKRKRIKNPNYKGKWKTP
WIDNPEFEDDPDLYVLKPLKYVGIEVWQVKAGSVFDNILICDDPEYARKVVEETVGANRE
AEKEAFEEAEKERKAREDREAQQGKDEGARRRRDKKDRYKRRYRDHWDDYHDEL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctcgccgccgccgcggcggcctgcgcggctgcctcctcgtcctctcgtcgctg
ctcctcctcgcgtccggcgaggtcttcttcgaggagcgcttcgaagatggctgggagtcc
cggtgggtggaatctgattggaaaaggagtgaagggaaagccggaaggttcaagcacaca
gcgggaagatactctggagatcctgacgacaaaggaatacaaacaacaatggatgctagg
cattttgctatctcagccaagttcccacaattcagtaacaagaacaggacactggtggtc
cagtactccattaagtttgagcaggatatcgagtgtggtggtggatacattaagcttatg
tccggttatgtcaaccagaaaaaatttagtggggacactccatacagcttgatgtttggg
ccagatatatgtggtactgatacaaagaagctgcatcttatactttcttaccaagggcag
aattatccaatcaagaaagatctagaatgtgagacggacaagttaacacatatgtatact
ttcattcttaggcctgacgcatcttatagcctacttgtcgataaccgtgaaagagaatct
gggagcatgtacactgactgggacatcctccctcctcgtaaaatcaagggtgttaatgcc
aaaaggcctaaggattgggatgacagagaatatattgatgatcctgatgatgttaagcca
gagggctatgattctatcccaaaacagattcctgatccgaaggacaaaaagcctgacaca
tgggatgacgatgatgatggcatatggaagcccagaatgatatcaaatccagcatacaag
ggaccatggaaacgcaagagaattaagaatcctaactacaagggtaaatggaagacccca
tggattgataatccagagtttgaggatgatccagatctgtatgtgctgaaacctttgaag
tatgttggaattgaagtttggcaggtaaaagctggttcagtttttgacaacattctgatt
tgtgatgaccctgagtatgcaagaaaggttgttgaggaaactgtgggtgcgaatagggag
gctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctagagaagatagggaa
gctcaacaaggaaaggatgaaggggctcggcgccgaagagacaagaaggacagatacaaa
agacgttacagggatcactgggatgactaccatgatgagctgtga
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