Panicum virgatum (switchgrass): 120710355
Help
Entry
120710355 CDS
T07260
Name
(RefSeq) proteasome subunit beta type-7-A-like
KO
K02739
20S proteasome subunit beta 2 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120710355
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120710355
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120710355
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120710355
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120710355
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
120710355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
120710355
NCBI-ProteinID:
XP_039851920
LinkDB
All DBs
Position
5K:57647440..57650714
Genome browser
AA seq
273 aa
AA seq
DB search
MTGSMDLPAKGGFSFDLCRRNDFLEKKGLKVPGFRKTGTTIVGLVFQDGVVLGADTRATE
GPIVADKNCEKIHFMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTALTL
LKSHLFKYQGHVSAALVLGGVDCTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKY
KEGLTREEGIQLVADAIRAGIFNDLGSGSNVDVCVITKGKTEYLRNYELPNPRTYVSSKG
YSFTKGQTEVLSAKIIPLKQKVEVAEGGDAMEE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctccatggatctcccagcgaagggcgggttcagcttcgacctgtgccgacgg
aacgactttctggagaagaaggggctcaaagtccccggtttcaggaagaccgggactacc
atcgtcggcctcgtcttccaggatggggttgttcttggggcagacacaagggcaactgag
ggtcctatagttgctgacaagaattgtgagaaaatccactttatggcaccaaacatctat
tgctgtggagcaggaacagctgctgacacagaggctgttacagatatggtgagctcccag
ctacagcttcaccgatatgcaaccggtcgtgaatcaagagtcgtgactgctcttacactg
ctgaagtcacaccttttcaagtatcaaggtcatgtcagtgctgctcttgttcttggtgga
gtggattgtactggaccacatctacacactgtttatccgcatggatccacagatactctt
ccttttgccacgatgggttctggatcgcttgctgcaatgtcggtgtttgagtcgaagtac
aaagaaggacttacaagggaggaggggatacaacttgtggccgatgccatccgtgctggt
atcttcaatgacttgggtagtggcagcaatgtggatgtctgtgtgataaccaaggggaag
acagaatacttgagaaactatgagttaccgaatccaagaacttatgttagctcaaaggga
tacagcttcaccaaggggcagactgaggtactgtccgcaaagatcataccactgaagcag
aaggttgaggttgctgagggtggtgatgcaatggaggagtga
DBGET
integrated database retrieval system
