Panicum virgatum (switchgrass): 120710361
Help
Entry
120710361 CDS
T07260
Name
(RefSeq) chromatin assembly factor 1 subunit FSM-like isoform X1
KO
K10750
chromatin assembly factor 1 subunit A
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120710361
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120710361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1A_dimeriz
Cac1_C
Motif
Other DBs
NCBI-GeneID:
120710361
NCBI-ProteinID:
XP_039851926
LinkDB
All DBs
Position
5K:57691454..57698612
Genome browser
AA seq
971 aa
AA seq
DB search
MESGGMVLGVARPEEAPDSNGAGARDDLGQSPMQVDGPVVLNRPAELDSGDSMATDDAPA
QAPSSQPEAPMQQSPATLTDTIVEVQKQLKRKRASNGPAIADADKDALVAGCRQELEGLF
QYYKEVSDRKMQFDGGNLSGNALVGCLLEESSLGLTKLVDEIYEKMKGLEGVSTASVRSS
VLLVGQRMMYGKSSPDADVLEDESESALWCWEIRDLKLMPVKARSTLGTRRSVRKKIHDR
IDAIYSTLSVLENRGVETQVNDLRKASLKLNKSLNLEEIRLMVERVTQKNNTERGVRDAG
STAKELMKEAEKNGQNVSRLDDASVSELQNGNLPANEKEIQKVQKQVEKEIKRQEKEEAQ
MRKLQKKQQEEALREQKRREKEEAEAKKQQKKQEEEALKEQKRREKEEAEMKKQQKKQQE
EAEKEQKRREKEAAQLKKQLAIQKQASMMERFFKSKKDSGKLQKSGDNDSAGPINKKEVP
ATTSKIDSSLSQQENWVLEDLRRLQVTGWQKLSSYNRSSRWSIRRKPKVEAFKELKLQKS
SDDMVDEILSTQNEDSCHNSSQENEHDKLESDIDMLPTSEAQCHGTSNAKPLQTRLIRRK
LLQFDKSNRPAYYGTWRKKSAVVGPRCPLKMDPDLDYEVDSDDEWEEEDPGESLSDCEKD
GDEVMEEDSKITDEDEDSFVVPDGYLSDNEGIQIESLLDDKDAEACSSPTGQCTEVEEFR
SLLRQQKVLNTLTEQALRKSQPLVISNLYHEKAELLTAEDLKGTAKVEQLCLQVLSMRIC
LGGAVVDVPSIDNSSASAEEINQSNVKNGSPASASAIPETDLPEIVQVIRSCRDGINKVV
ELLHQKFPNVSKYQLNRRVREISDFVDNHWKVKKEILDKLGLDSSPGTLLHLFFWRYEYL
ALTNILTNDCFSVKCKKTKGIAMYFSKRCLPPEEAINALASSPELCLKSKTIQNGNGGTE
APQINLFPSSQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggcggcatggttcttggcgttgctcgccccgaagaagcccccgacagcaac
ggcgcaggggcacgcgacgatttggggcaatcgccgatgcaagtcgacggccccgttgtc
ctcaaccggcccgccgagctcgactcgggtgactcgatggccaccgatgacgccccggcg
caagcaccgtcaagccaaccggaggcgccgatgcagcagtctcctgctacgctgacggac
accatcgtggaggtgcagaagcagctgaagcggaagagggcctccaacggcccggcgatt
gctgacgcggacaaggacgctcttgtcgccggatgccggcaggagctcgagggcctcttc
cagtattacaaggaggtttctgatcgcaagatgcagtttgatggtgggaacctgtccggc
aacgcgttggttggctgcttgcttgaggagagcagtcttgggctgaccaagttggtggac
gagatatatgagaagatgaagggattggagggtgtgtcgacggcttcggtccgtagctct
gtcctgctcgttgggcagaggatgatgtacgggaaatcttccccggatgctgacgtgttg
gaagatgaatcagagtcagctctttggtgctgggagataagagatctgaagctgatgcct
gtgaaagcacgcagcactctcggtacaaggagatctgtcagaaagaaaatccatgatagg
atcgatgccatctattcaactttgtcagttctggaaaaccgaggagttgaaacccaagtg
aatgatctcaggaaagcatcattaaaattgaataaatcattgaacctggaagagatcaga
ttaatggtggaacgagtgactcagaagaacaacacagaaagaggtgtgagagatgctggg
tcaacagctaaggaattgatgaaagaagcagagaaaaatggccaaaatgttagcagactt
gacgatgcgagtgtctctgaactgcagaatggaaacttgcctgctaatgaaaaggagatt
cagaaagtgcaaaaacaagttgagaaggaaataaaacgccaggagaaagaagaagctcag
atgaggaaattacaaaagaaacagcaagaagaggcactaagggaacagaagagacgtgaa
aaggaagaagctgaagctaagaaacaacaaaaaaagcaagaagaggaagcattgaaagaa
cagaagcgtcgtgaaaaggaagaagccgaaatgaagaaacagcagaaaaaacagcaagag
gaagctgagaaagaacagaaacggcgtgagaaggaagctgcacaactcaagaagcaacta
gccattcaaaagcaagcttctatgatggagcgctttttcaaaagtaagaaagacagtgga
aaacttcaaaaatctggagataatgactcggctggtcccattaacaaaaaagaagttcca
gcaaccacatcaaaaattgattcttccttgtctcaacaagagaactgggttttagaggat
cttcggagattgcaggtcactggttggcagaagctatctagctacaatagatcctccaga
tggagtattaggcgcaaacccaaggtggaggcatttaaagagctcaagcttcaaaaatct
tcagatgatatggttgatgaaatactttccactcaaaatgaagatagctgccacaactca
agtcaggagaatgaacatgataagcttgaaagtgacattgacatgctaccaacaagtgag
gcgcaatgtcatggcaccagtaatgctaaacctttgcaaactagattgattaggaggaaa
cttctgcaatttgacaaaagtaacaggccagcgtattatgggacctggaggaagaaaagt
gctgttgttggcccaagatgtccacttaagatggatcctgatcttgactacgaggttgat
agtgatgatgaatgggaagaggaggatcctggtgagagtctttctgactgtgagaaggat
ggtgatgaagttatggaagaagattccaaaattacagatgaagatgaagatagctttgtt
gtgcctgatggctatctctcggacaatgaggggatacagatagaaagtctattggatgat
aaggatgcggaagcttgtagctcaccaactggtcagtgcacagaagttgaagaattcagg
tctttactccgccagcaaaaagtcctgaacactttgactgagcaggctcttcggaagagc
cagcctcttgttatatccaacctatatcatgaaaaagctgaattactgactgccgaagac
ctcaagggaacagcaaaggttgaacaactatgtctgcaagttctttcaatgcgcatctgt
ctgggaggtgcggttgttgatgtgccttctattgacaactcatctgcaagtgctgaggaa
attaaccagtccaatgtgaaaaatggttctcctgcttctgcatctgctataccagaaaca
gacctaccagaaattgttcaggtgattcgatcatgtcgagatggtatcaacaaggtggtc
gaattactgcatcagaagtttccaaatgtttcaaagtatcaattaaaccgtagagtgagg
gagatatctgactttgttgataatcattggaaggtcaagaaagagattcttgacaagcta
ggcctggattcttcaccaggtactcttctccacctgttcttttggcgatatgaatacttg
gccttgacaaatattctcacaaacgattgtttttcagtgaaatgcaaaaagactaaaggc
atagccatgtacttctcgaagcggtgtttacctccagaagaggccatcaatgctctggca
tcttcacctgagctgtgcttgaaatctaaaaccattcaaaatggcaacggtggcactgaa
gctcctcagattaatctgttcccctcgtcccagtag
DBGET
integrated database retrieval system
