Panicum virgatum (switchgrass): 120710382
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Entry
120710382 CDS
T07260
Name
(RefSeq) AP2-like ethylene-responsive transcription factor BBM2
KO
K09285
AP2-like factor, ANT lineage
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120710382
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
120710382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
120710382
NCBI-ProteinID:
XP_039851972
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All DBs
Position
5K:complement(57894280..57898760)
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AA seq
699 aa
AA seq
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MATVNNWLAFSLSPQDLPPSQTDSTLISAAATDEVSGDVCFNIPQDWGMRGSELSALVSE
PKLEDFLGGINFSEQHHKANLNVIPSSSSTCYASSGASSAGYHQLYHHPSSALHFADSVM
VASSAGVHDGGAMISAATASGGAGAAGANGGSIGLSMIKNWLRSQPAPAPPQPRVAVAEG
AQAAQGLSLSMNMAGTQGAGMPFLAGERGRAPESASTSAQGGAVAARKEDSGGSGGAGAL
VTVSTDTGGSGGASAETAARKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQT
RKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEEMKHMTRQEFVAS
LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAI
KFRGLNAVTNFDMSRYDVKSILDSSALPIGSAAKRLKEAEAAASAQHHAGVVSYDVGRIA
SQLGDGGALAAYGAHYHAAAAAWPTIAFQPGAAAAGLYHPYAQPLRGWCKQEQDYAVIAA
AHSLQELNHLNLGAGAHDFFSAGQAAMHGLGSIDNSSLEHSTGSNSVVYNGVGDSNGGAV
GGGYMMPTSAAAAATTTAMVSHEQVHARAQGDHDEASKRAAHMGYESYLVNAEAAYGGGR
MPSWTTASAPPVAAAASSNDNMAGVGHGGAQLFSVWNDT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtgaacaactggctggctttctccctctccccgcaggatctgccgccttcc
cagacggactccaccctcatctccgccgccgccaccgacgaggtctccggcgacgtctgc
ttcaacatcccccaagattggggcatgaggggatcggagctttcagcgctcgtctccgag
cccaagctggaggacttcctcggcggcatcaacttctcggagcagcatcacaaggccaac
ctcaacgtgatccccagcagtagcagcacttgctacgcgagctcaggtgctagctccgcc
ggctaccaccagctgtaccaccaccccagctccgcgctccatttcgctgactccgtcatg
gtggcctcatccgccggcgtccatgacggcggtgccatgatcagtgcggccaccgccagt
ggtggagctggcgctgccggcgccaatggcggcagcatcgggctgtccatgatcaagaac
tggctgcggagccaaccagctccggcgccgccgcagccgagagtggcggtggccgagggc
gcgcaggcggcgcagggtctctctttgtccatgaacatggcggggacgcaaggcgctggc
atgccgtttctcgccggtgagcgaggccgggcgcccgagagcgcatccacgtcggcacag
ggtggagccgtcgccgctcggaaggaggacagcggtggcagcggcggtgccggcgcccta
gtaacagtgagcacggacacgggtggcagcggcggcgcgtctgctgagacggcggcgagg
aagacggtggacacgttcggccagcgcacgtcgatttaccgtggcgtgaccaggcataga
tggacggggaggtacgaggctcacctgtgggacaacagttgcagaagggaaggacaaact
cgcaagggtcgtcaagtctatctaggtggttatgacaaagaggagaaagctgctagggct
tatgatttggctgctcttaagtattggggtcccacgacgacaacaaattttccggtgagt
aactacgaaaaggagttggaggaaatgaagcacatgacaaggcaggagtttgttgcttct
ctgagaaggaagagcagtggcttctccagaggtgcatccatttacagaggagtaactagg
catcaccaacatgggagatggcaagcacggattggacgagttgcagggaacaaggatctc
tacttgggcaccttcagcacgcaggaggaggcagcggaggcgtacgacatcgcggcgatc
aagttccgcggcctcaacgccgtcaccaacttcgacatgagccgctacgacgtgaagagc
atcctggacagcagcgcgctccccatcggcagcgccgccaagcgcctcaaggaggccgag
gccgccgcgtccgcgcagcaccatgccggcgtggtgagctacgacgtcggccgcatcgcc
tcgcagcttggcgacggcggcgccctggcggcctacggcgcgcactaccacgccgccgcc
gccgcctggccgaccatcgcgttccagccgggcgccgccgccgccggcctgtaccacccg
tacgcgcagcctctgcgcgggtggtgcaagcaggagcaggactacgccgtgatcgcggcc
gcgcacagcctgcaggagctcaaccacctgaacctgggcgccggcgcgcacgacttcttc
tcggcggggcaggcggcgatgcacggcctcggcagcatcgacaactcctcgctcgagcat
agcaccggctccaactccgtcgtgtacaacggggttggggacagcaacggtggcgccgtc
ggcggcggctacatgatgccgacgagcgccgccgccgcggcgaccaccacggcgatggtg
agccacgagcaggtgcacgcacgggcacagggggaccacgacgaagccagcaaacgggcg
gcgcatatggggtatgagagctacctagtcaacgcagaggcggcctacggtggcgggagg
atgccttcctggacgacggcctcggctccaccggtggcggcagcggcaagcagcaacgac
aacatggccggcgttggccatggcggcgcgcagctcttcagtgtctggaatgacacttaa
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