Panicum virgatum (switchgrass): 120710403
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Entry
120710403 CDS
T07260
Name
(RefSeq) jasmonoyl--L-amino acid synthetase GH3.3-like
KO
K14487
auxin responsive GH3 gene family
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120710403
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Motif
Pfam:
GH3
GH3_C
GH3_M
DprA_WH
Motif
Other DBs
NCBI-GeneID:
120710403
NCBI-ProteinID:
XP_039852029
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Position
5K:complement(1612867..1619076)
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AA seq
601 aa
AA seq
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MKHSSSSGKTMMLGKKTKKKSEFNGEEVIAEFERLTLDAAAVQRETLRRILDENGAVEYL
QRLGLAGRTDPAAFRACVPLVTHGDLEPYIGRIADGDTSPVLTAKPVTAISLSSGTTQGK
RKYLPFNDELIKLTMHVYRTSFAFRNRVFPVDGGKALQFVYGSRPFTTKGGLTATTATTN
LYRNEEYKAAVRDIQLPRCSPDEVIFGPDFAESLYCHLLCGLLFAGEVRAVFTMFGHNLA
LAFETLERVWEELCHDIRRGAPSPARVTDPAVRRAVSALLAPNPALADEVARRCAGLRNW
YGVIPALWPNARYVHTIVTGSMENYVRKLRHYAGGLPLVAMDYGASEGMVGANLEPEMPP
ESATFTVLRNIAYFEFIPLKTSDGGETCPDTSYAEEPVSLTEVTVGEQYEVVRTTFAGLY
RYRLGDVVKVARFYNSTPKLKFACRGMLTLSLNVDRNSEQDVQLAVDGAAKILAAAAAER
LEVLDYTSHADVSSDPGHYVIFWELSAAEADDDVLQSCCDELDRGFVDAGYMSSRKTNAI
GPLELRVLQPGTFRKVMDNYLSLRAPVNQFKLPQCVAGSNSSVLRILSSSTVKVLFSTAY
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatagttcttcaagcggcaagacgatgatgttggggaagaagacgaagaagaag
agtgagttcaacggtgaggaggtgatcgccgagttcgaacggctgaccctggacgccgcc
gccgtccagcgggagacgcttcggcggatcctcgacgagaacggcgccgtcgagtacctc
cagaggctcggcctcgccggccgtaccgacccggccgccttccgggcctgcgtgccgctc
gtcacgcacggcgacctcgagccctacatcggccgcatcgccgacggcgacacctccccc
gtcctcaccgccaagcccgtcaccgccatctccctcagctccggcaccacgcaggggaag
cgcaagtacctgcccttcaacgacgagcttatcaagctgacgatgcacgtgtaccggact
tccttcgctttcaggaacagggtgttccccgtcgacggcggcaaggcgctgcagttcgtc
tacggaagccggccgttcacgaccaagggcggcctcacggcgaccacggccaccaccaac
ctgtaccgtaacgaggagtacaaggccgcggtgcgcgacatccagctgccgcgctgcagc
cccgacgaggtgatcttcggcccggacttcgcggagtcgctctactgccacctcctctgc
ggcctgctcttcgccggcgaggtccgggccgtgttcaccatgttcgggcacaacctcgcg
ctcgcgttcgagaccttggagcgcgtgtgggaggagctctgccacgacatccgccgcggc
gccccgtcgccggcgcgggtgaccgacccggccgtccggcgggcggtgtcggccctcctg
gcgccgaaccccgcgctggccgacgaggtggcgcgcaggtgcgccgggctccgcaactgg
tacggggtgatcccggcgctgtggcctaacgcgaggtacgtgcacacgatcgtgacgggg
tccatggagaactatgtcaggaagctccggcactacgccggcggcctgccgctcgtcgcc
atggattacggtgcgtcggaggggatggtcggtgccaacttagagccggagatgccgccg
gaatcagccacgttcaccgtgctccgcaacattgcctacttcgagttcatccctctcaag
accagtgacggcggcgaaacctgtcctgacacgagctatgccgaggagcctgtcagtttg
acggaggtcaccgtcggcgagcaatacgaagttgtcaggaccaccttcgcaggattatac
cggtaccgtctgggagatgtggtgaaggtggccaggttttacaactccactccaaagctc
aagttcgcgtgccgagggatgctcacactgtccctcaacgtcgacaggaacagcgagcag
gacgtccagctcgccgtcgacggtgcggccaagatcctagccgccgccgccgccgagagg
ttggaggtcctggactacaccagccacgccgacgtgtcgtcggacccgggccactacgtc
atcttctgggagctcagcgccgccgaggctgacgacgacgtgctgcagagctgctgcgat
gagctggacagaggcttcgtcgatgctggctacatgagctcgaggaagacgaacgccatc
gggccgttagagctgcgggtcctgcagccgggcaccttccgaaaggtgatggacaattac
ctctccctcagagctcctgtcaaccagttcaagctgccacagtgcgttgccggatccaac
tcgagcgtcctccgcattctctctagcagcaccgtgaaggtcttgttcagcacggcctac
ggatag
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