KEGG   Panicum virgatum (switchgrass): 120710444
Entry
120710444         CDS       T07260                                 
Name
(RefSeq) aspartic proteinase CDR1-like
  KO
K22683  aspartyl protease family protein [EC:3.4.23.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvir01002]
    120710444
Peptidases and inhibitors [BR:pvir01002]
 Aspartic peptidases
  Family A1: pepsin family
   120710444
SSDB
Motif
Pfam: TAXi_N TAXi_C Asp
Other DBs
NCBI-GeneID: 120710444
NCBI-ProteinID: XP_039852063
LinkDB
Position
5K:complement(4873457..4874884)
AA seq 447 aa
MGATTMLVLSAMLLLLAEQRARAASDAGFSVEFIHRDSPRSPFHDPALSPHGRMLAAARR
SLHGQVPGGSAPAPAADGGVESKIISRSFEYLMAVNIGTPPTQLLAIADTGSDLVWVDCR
NGSGAPAAAGGVVFEPSSSSTYDVVGCQSEACQGLNQASCDADSYCQYQYAYGDGSRTVG
VLSTETFSFADGGGGARQVRVPHIDFGCSTYMAGTFRADGLVGLGGGAVSLVSQLGSATP
FGRRFSYCLMPSYAANSSSTLNFGSRAVVSEPGAATTPLVPGEVAAYYTVALESVAVGGR
TVASHSSAIIVDSGTTLTFLHPALLRPLVAELGRRINLTRAQPPEQLLEVCYDVSGRAQE
EWGVPDVALRFGGGGGGDVTLRPENTFVLVQEGTLCLALVPVSESQPVSILGNVAQQNFH
VGYDLDARIVTFAPADCARSPASAASS
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtgcgacgacgatgctcgtcctctccgccatgctcctgctcctcgccgagcaacgg
gcccgcgcggcgtccgacgccgggttcagcgtggagttcatccaccgcgactcgccgagg
tcgccgttccacgacccggcgctgtccccgcacggccggatgctcgcggccgcgcgccgc
tcgctccacggccaggtgcccgggggctcggcgccggcgcccgcggccgacggcggcgtc
gagtccaagatcatctcccggtcgttcgagtacctgatggcggtgaacatcggcacgccg
ccgacgcagctgctcgcgatcgccgacacaggcagcgacctcgtgtgggtcgactgcagg
aacggcagcggcgctcccgccgccgccggcggcgtggtgttcgagccgtcgagctcgtcg
acgtacgacgtcgtggggtgccagtccgaagcgtgccaggggctgaaccaggcctcctgc
gacgccgactcctactgccagtaccagtacgcgtacggcgacgggtcccgcacggtcggg
gtcctgtccaccgagacgttcagcttcgccgacggcggcggcggcgcgcgccaggtgcgc
gtgccccacatcgacttcgggtgctcgacgtacatggccggcaccttccgcgcggacggg
ctcgtcgggctcggcggcggcgccgtctccctcgtgtcgcagctcgggtccgcgacgccg
ttcgggcgccggttctcctactgcctgatgccgtcctacgccgccaactcgtcgtccacg
ctcaacttcgggtcccgggccgtcgtgtcggagcccggcgcggcgacgacgccgctggtg
cccggggaggtggcggcgtactacaccgtggcgctcgagtccgtggcggtgggcgggcgg
acggtggcgtcccacagctcggccatcatcgtggactccggcacgacgctgacgttcctg
caccccgcgctgctgcggccgctggtggcggagctggggcggcggatcaacctgacccgg
gcgcagccaccggagcagctgcttgaggtgtgctacgacgtgagcgggagggcgcaggag
gagtggggggtaccggacgtggcgctgcggttcggcggcggcggcggcggggacgtgacg
ctccggccggagaacacgttcgtgctggtgcaggaggggacgctgtgcctggcgctggtg
cccgtgtccgagtcgcagccggtgtcgatcctggggaacgtcgcgcagcagaacttccac
gtcgggtacgacctcgacgcgcgcatcgtcaccttcgcccccgccgactgcgcccgctcg
ccggcgtcggccgcctccagctga

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