Panicum virgatum (switchgrass): 120710444
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Entry
120710444 CDS
T07260
Name
(RefSeq) aspartic proteinase CDR1-like
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120710444
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120710444
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Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
120710444
NCBI-ProteinID:
XP_039852063
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Position
5K:complement(4873457..4874884)
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AA seq
447 aa
AA seq
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MGATTMLVLSAMLLLLAEQRARAASDAGFSVEFIHRDSPRSPFHDPALSPHGRMLAAARR
SLHGQVPGGSAPAPAADGGVESKIISRSFEYLMAVNIGTPPTQLLAIADTGSDLVWVDCR
NGSGAPAAAGGVVFEPSSSSTYDVVGCQSEACQGLNQASCDADSYCQYQYAYGDGSRTVG
VLSTETFSFADGGGGARQVRVPHIDFGCSTYMAGTFRADGLVGLGGGAVSLVSQLGSATP
FGRRFSYCLMPSYAANSSSTLNFGSRAVVSEPGAATTPLVPGEVAAYYTVALESVAVGGR
TVASHSSAIIVDSGTTLTFLHPALLRPLVAELGRRINLTRAQPPEQLLEVCYDVSGRAQE
EWGVPDVALRFGGGGGGDVTLRPENTFVLVQEGTLCLALVPVSESQPVSILGNVAQQNFH
VGYDLDARIVTFAPADCARSPASAASS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgacgacgatgctcgtcctctccgccatgctcctgctcctcgccgagcaacgg
gcccgcgcggcgtccgacgccgggttcagcgtggagttcatccaccgcgactcgccgagg
tcgccgttccacgacccggcgctgtccccgcacggccggatgctcgcggccgcgcgccgc
tcgctccacggccaggtgcccgggggctcggcgccggcgcccgcggccgacggcggcgtc
gagtccaagatcatctcccggtcgttcgagtacctgatggcggtgaacatcggcacgccg
ccgacgcagctgctcgcgatcgccgacacaggcagcgacctcgtgtgggtcgactgcagg
aacggcagcggcgctcccgccgccgccggcggcgtggtgttcgagccgtcgagctcgtcg
acgtacgacgtcgtggggtgccagtccgaagcgtgccaggggctgaaccaggcctcctgc
gacgccgactcctactgccagtaccagtacgcgtacggcgacgggtcccgcacggtcggg
gtcctgtccaccgagacgttcagcttcgccgacggcggcggcggcgcgcgccaggtgcgc
gtgccccacatcgacttcgggtgctcgacgtacatggccggcaccttccgcgcggacggg
ctcgtcgggctcggcggcggcgccgtctccctcgtgtcgcagctcgggtccgcgacgccg
ttcgggcgccggttctcctactgcctgatgccgtcctacgccgccaactcgtcgtccacg
ctcaacttcgggtcccgggccgtcgtgtcggagcccggcgcggcgacgacgccgctggtg
cccggggaggtggcggcgtactacaccgtggcgctcgagtccgtggcggtgggcgggcgg
acggtggcgtcccacagctcggccatcatcgtggactccggcacgacgctgacgttcctg
caccccgcgctgctgcggccgctggtggcggagctggggcggcggatcaacctgacccgg
gcgcagccaccggagcagctgcttgaggtgtgctacgacgtgagcgggagggcgcaggag
gagtggggggtaccggacgtggcgctgcggttcggcggcggcggcggcggggacgtgacg
ctccggccggagaacacgttcgtgctggtgcaggaggggacgctgtgcctggcgctggtg
cccgtgtccgagtcgcagccggtgtcgatcctggggaacgtcgcgcagcagaacttccac
gtcgggtacgacctcgacgcgcgcatcgtcaccttcgcccccgccgactgcgcccgctcg
ccggcgtcggccgcctccagctga
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