Panicum virgatum (switchgrass): 120710501
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Entry
120710501 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxylase 4
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
Module
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pvir_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120710501
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120710501
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
120710501
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-GeneID:
120710501
NCBI-ProteinID:
XP_039852107
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All DBs
Position
5K:10453003..10462569
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AA seq
1037 aa
AA seq
DB search
MLDTTDDIAEGISFQAFEDDCRLLATLLHDVLLRELGPRFIHILERYRILAQSAVSMRAA
GMEDTAAVVERQLEADLAAMPLEDALCVARAFSHYLNLMGIAETHHRVRKARNVEKLSKS
CDDIFDKLIQSGVPPEQLYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRVAHLLEFNARP
DLSHEDKETLIEDLVREITAIWQTDELRRHKPTPVDEARAGLHIVEQSLWKAVPHYLRRV
SSALKKHTGRTLPLTSTPIKFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIRELE
NLSFELSVKRCSDKIANLANEILLKESASEDLKANTWNQTVPQNNTKLHHSLALPAQLPS
GADLPSCTECSDGESQFRIINLPRNRSRPGALNVPEKFEDSPLSSPTGRQSQLGRTASGG
QLRKLFKESHIGRSSSFRKLLEPSISDKPGITPYRVVLGNVKEKLVKTRRRLELLLEDLP
CDYDTEEYCETSAQLLEPLLLCHQSLESCGSSVLADGRLADLIRRVATFGMVLMKLDVRQ
ESGRHTEALDAVTSYLDLGVYSEWDEEKKLDFLTRELKGKRPLVPPNIEVAADVKEVLDT
FKVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLTVSGDLGRPCPGGTLRVVPLFE
TVKDLQEAGAAIRKLLSIDWYREHIIRNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQE
DVVAACNEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFG
LPQTAVRQLEIYTTAVLLATLRPPQPPRDPSWRNLMDDISRVSCAHYRRTVYEDPEFITY
FQEATPQAELGFLNIGSRPAKRKPAGGIASLRAIPWVFAWTQTRLVLPAWLGVGAGLQDA
LDRGRGGELRAMYAEWPFFQSTVDLIEMVTAKADAPMAAHYEEMLVARERRALGGELRRE
LARTERCVLAVSGHSKLTAHNRSLRRLIESRLAYLNPINMLQVEVLRRLRQDDDNRRLRD
ALLITINGIAAGMRNTG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgctggacacgacggacgacatcgcggaggggatatcgttccaggcgttcgaggatgac
tgccgcctcctcgccaccctcctccacgacgtcctcctccgcgagctcggcccccgcttc
atccacatcctcgagcgctaccgcatcctcgcgcagagcgccgtctccatgcgcgcggcg
gggatggaggacacggcggccgtcgtcgagcgccagctggaggccgacctggccgccatg
cccctcgaggacgcgctctgcgtcgcccgggccttctcgcactacctcaacctcatgggc
atcgcggagacccaccacagggttcgtaaagcacggaacgtagaaaaactctcaaaatca
tgtgacgacatattcgacaagctgattcaaagtggtgtccctccggaacaactatatgac
actgtttgcaagcaggaggttgaaattgttctgacagctcaccccacacaaataaatcgg
cgaactttgcaatacaagcaccttagagtagctcatcttttggagttcaatgcacgccct
gatcttagccatgaggataaagaaacgctaattgaggatctggtaagggaaatcacagca
atatggcagacagatgagttgaggcgccataaacctacaccagttgatgaagcaagggct
ggtcttcatatcgtggagcaatccctttggaaagcggtaccgcactatcttcgccgtgtc
agcagtgctctaaagaagcacactggaaggacactgccgctaacctccacaccaatcaag
tttggttcttggatgggtggtgaccgggacgggaatcctaatgttacagcaaaagtgact
agggatgtttcgttgttgtcccggtggatggcaattgacttatacatcagggaattggag
aatctcagctttgagctgtctgtcaagagatgcagtgacaagattgcaaacttggctaat
gaaattttgctcaaagagtcagcgtccgaggacctaaaggccaacacctggaaccaaaca
gtacctcaaaacaacacaaaactacatcatagcttggcactacctgcgcaacttccttct
ggtgctgatcttccttcatgtacagaatgcagtgatggagaatcccaattcaggatcata
aatcttccaaggaaccgaagtcgtccaggagctcttaatgtgccagaaaaatttgaagac
agtccattgtcatctcctactgggcgtcaatcacagctaggtagaactgcaagcgggggt
caactgaggaagttgttcaaagaatctcatattggtcgatcaagtagcttccgtaagcta
cttgagccaagcatatcagacaaaccaggaattactccttacagggttgtccttggtaat
gtgaaagaaaagctggtgaagacacgcagaaggctcgaacttcttcttgaggatttaccg
tgcgattatgacactgaagaatattgtgaaacatcagctcaacttttggagcccttgctc
ttgtgccatcaatcactggaatcatgtggatctagcgtgcttgctgatggccggttagca
gatttgatacgaagggttgcaacctttggcatggtgctaatgaagctcgacgtgcgccag
gaatctggtcgacacacagaagcacttgatgccgtcacatcttacttggatcttggtgtt
tatagtgagtgggatgaagaaaagaagttggatttcttgactagagagcttaaagggaag
cgtcctcttgttcctccaaacatagaggttgctgctgatgtgaaagaagttctggacacc
ttcaaagttgctgcagaattagggagcgactcacttggagcatatgtgatctcaatggcc
tcaaatgcaagtgatgtcctcgctgttgagctgttgcagaaggatgcaagactaacagtt
agcggggacctaggaaggccatgtcctggtggaacgttaagggtcgttcccttgttcgag
accgtgaaagatttgcaagaagccggcgcagcaatcaggaagctgctatccatcgactgg
tacagggagcacatcatcaggaaccacaacggccaccaggaggtcatggtgggatactcg
gactccggcaaggacgccgggcgcttcacggccgcatgggagctgtacaaggctcaggaa
gacgtggtcgccgcgtgcaacgagttcgggatcaaggtgacgctcttccacggccgcggc
ggcagcatcggccgcggcggcgggccgacgtacctggccatccagtcgcagccgccgggc
tcagtaatgggcacgctccggtcgacggagcaaggcgagatggtgcaggccaagttcggg
ctgccgcagaccgccgtccggcagctggagatctacacgacggcggtgctgctggcgacg
ctgcggccgccgcagccgccgcgcgaccccagctggcggaacctgatggacgacatctcc
cgggtgagctgcgcgcactaccggcgcacggtgtacgaggacccagagttcatcacctac
ttccaggaggcgacgcctcaggcggagctggggttcctcaacatcggcagccggccggcg
aagcggaagccggcggggggcatcgcgagcctgcgcgccatcccctgggtgttcgcgtgg
acgcagacgcggctggtgctgccggcgtggctgggcgtcggggcggggctgcaggacgcg
ctggaccggggccgcggcggggagctccgcgccatgtacgcggagtggcccttcttccag
agcacggtggacctgatcgagatggtgacggccaaggcggacgcgcccatggcggcgcac
tacgaggagatgctggtggcgcgggagcggcgcgcgttgggcggcgagctgcggcgggag
ctggcgcgcacggagcggtgcgtgctggcggtgagcgggcacagcaagctgacggcgcac
aaccggagcctgcggcggctcatcgagagccgcctcgcctacctcaaccccatcaacatg
ctgcaggtggaggtgctccgcaggctccgccaagacgacgacaaccgcaggctccgcgac
gcgctgctcatcaccatcaacggcatcgccgccggcatgcgcaacaccggctga
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integrated database retrieval system