Panicum virgatum (switchgrass): 120710544
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Entry
120710544 CDS
T07260
Name
(RefSeq) transcription factor CSA-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120710544
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120710544
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
120710544
NCBI-ProteinID:
XP_039852138
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Position
5K:complement(14218216..14219717)
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AA seq
317 aa
AA seq
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MVHEMACFSGRAPPAAALSPFHDEQDPAVVPEEVYHGHEEGLEDASCGRGHGAGGGQGKR
STRGHWRPAEDAKLKELVAQHGPHNWNLIAENLDGRSGKSCRLRWFNQLDPRINRRAFSE
AEEERLLAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLAARRHRVQCGAIRRRKPSSSS
CTAATSSSHFAPAAVAGRRRYGSPPLPSHAGDAHAQEHGVRTEAAAAAAASGSESVESAS
TGTTDLSLGSAGAAAVPCFYQSSSAGYDVRPRAAALAPGARSVFCVPSPARHRAAASDDG
CGRLARPFYDFLGVGAT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgagatggcttgcttctccggccgtgctccaccggcggcggctctgtccccg
ttccacgacgagcaggacccggccgtcgttccggaggaggtgtaccacggccacgaagag
ggcctggaggatgctagctgcggccgtggccacggcgccggcggtgggcaggggaagcgg
agcacgagaggccactggcgccccgccgaggacgccaagctcaaggagctcgtcgcgcag
cacgggccccacaactggaacctcatcgccgagaacctcgacggccgatcagggaagagc
tgccggctgcggtggttcaaccagctggacccgcggatcaaccggcgtgccttctcggag
gcggaggaggagcgcctcctggcggcgcaccgcgcctacggcaacaagtgggcgctcatc
gcccgcctcttcccgggccgcaccgacaacgccgtcaaaaaccactggcacgtcctcgcc
gcgcgcaggcaccgcgtgcagtgcggcgcgatccggcgccgcaagccctcctcctcctcc
tgcaccgccgccacctcctcgtcgcacttcgcgccagccgccgtcgccggccgccgccgc
tacggctcccctccgctgccgtcccacgccggcgatgcgcacgcccaggagcacggcgtc
cgcacggaggcggcggcggcggcggcggccagcggcagcgagtccgtggagtccgcatcc
accggcaccaccgacctctccctcggctccgccggcgcggccgccgtcccctgcttctac
cagagttcgagcgccggctacgacgtgcgccctcgcgccgccgcgctcgcgcccggcgcg
cgctccgtgttctgcgttccctcgccagcacgccaccgggcggcggcctccgacgacggc
tgcggcaggctcgcccggcccttctacgacttcctcggcgtcggtgcgacatga
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