KEGG   Panicum virgatum (switchgrass): 120710738
Entry
120710738         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120710738
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120710738
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120710738
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120710738
  Eukaryotic Sec-SRP protein
   120710738
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW AAA_22 nSTAND3 AAA Fe-ADH 6PF2K AAA_33 AAA_19 AAA_17 ATP_bind_1 AAA_16 ResIII vWA-TerF-like NPHP3_N
Other DBs
NCBI-GeneID: 120710738
NCBI-ProteinID: XP_039852263
LinkDB
Position
5K:complement(47756790..47759445)
AA seq 475 aa
MVLAQLGGSIARALARMKDATVVDDKVLADCLNEISRALLQADVRFETVRDVKAGIKSTV
NLDALAAGTDKRRVIHTAVAGELCRMLDPGKPAFTPSKGKPNVVMFVGLQGSGKTTTCTK
YADYYRWKGFSPALVCADTFQADAFDQLKQNAAKAKIPFYGSYIESDPMKIAIEGVDKFR
KEKCDLIIVDTSGRHKQEAALFEQMLQVSEATKPNLVIFVMDGSIGQAAFDQAQAFKQSA
SIGSVIITKMDGHAKGGGALSAVAATRSPVIFIGTGEHIPNFEVFDVKPFVSRLLGMGDL
SGLMDKIQDVMPADEVLPKLTKGAFTLRLLYEMFQNLQNMGPLGQLFSMIPGLSAQFIEK
GKEKEGQAKIKRYMTIMDSMTEKELDNTNPKLMNKSRINRIARGSGRPVKEVVDVLEEHK
RIAKMWSKLPFRRPLTNNRDSFKSLVNALPPNMLNQLGGLNGLQNMMKQMGSKKR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatcgcccgcgcgctggcgcggatgaaggacgcg
accgtggtggacgacaaggtgctcgccgactgcctcaacgagatctcgcgcgcgctcctg
caggccgacgtccgcttcgagacggtgcgcgacgtcaaggctggcatcaagagcaccgtc
aacctcgacgcgctcgccgcgggcaccgacaagcgccgcgtcatacacacggccgtcgcc
ggtgagctatgcagaatgctggatccagggaagccggccttcacccccagcaaagggaag
cccaacgtggtcatgttcgtcggcttgcagggttccggaaaaaccactacttgtacaaag
tatgcagattactatcggtggaaagggtttagtccagcacttgtttgtgccgatacattc
caagccgatgcttttgatcagttgaaacagaatgcagcaaaagccaagatacccttctac
ggaagctacatcgagtcagatcctatgaaaattgctattgagggtgtggataaattcaga
aaagaaaagtgtgatctcattattgtagatacaagtggacgtcacaagcaggaagctgct
ctctttgaacaaatgctccaagtttcagaggctacgaaaccaaacctagtgatatttgtg
atggatggtagtattggtcaggctgcatttgatcaggcgcaagcatttaaacagagtgct
tccattggttctgttattattacaaaaatggatgggcatgcaaaaggcgggggtgcactt
agcgcggttgcagctacaagaagcccggtcatatttattggaactggagagcatattcca
aattttgaagtcttcgacgtgaaaccatttgttagtcgcctattaggcatgggagacttg
tctggcttgatggacaagatccaagatgttatgccagctgatgaagtcttgccgaagctg
actaaaggagctttcactctcagacttttgtatgagatgttccagaatctccagaatatg
ggtcctcttgggcagctcttttctatgatacctggtcttagtgcccagtttattgaaaaa
ggaaaggaaaaggaaggtcaagcaaagattaagaggtacatgacgatcatggactccatg
actgaaaaagagcttgacaacacgaacccaaagttgatgaacaagtcgcggatcaaccgt
atcgctcgaggatctggcagacctgtcaaggaagtggtggacgtgttggaggagcacaag
agaattgccaaaatgtggagcaaattgccgttcaggagaccattaactaacaaccgtgac
tcatttaagtcgctagtcaatgcacttcctccaaatatgctgaaccagctgggtggcctg
aatgggctacagaatatgatgaaacagatgggttctaagaaaagatga

DBGET integrated database retrieval system