Panicum virgatum (switchgrass): 120710769
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Entry
120710769 CDS
T07260
Name
(RefSeq) protein MICRORCHIDIA 6-like
KO
K24135
MORC family CW-type zinc finger protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120710769
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120710769
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Morc6_S5
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120710769
NCBI-ProteinID:
XP_039852291
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Position
5K:complement(51529750..51535195)
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AA seq
772 aa
AA seq
DB search
MNSNRPTDVTTDAMDAERDIKPFLSPTTATPIQRGVHGPGTFQAAARQLESGGARVLTGV
QPQTLAEAACALNRAASELSGGTGDRTSCANEAFEGTSVRRPCPAPRFSRKFWGAGDYDA
GAGSSAPQPSVQNRMCVHPEFLHSNATSHKWPFGAVAELLDNAVDEVETGGATKVIVDKV
INNRNGSPALLVQDDGGGMDPDSLRRCMSFGFSEKQSGSSIGQYGNGFKTSTMRLGEDVI
VFSRCTKSGGPTQSIGLLSYTFLVETGQTDVIVPVVDYKCNLLRGQTTRLERHGSEHFSS
NLSVLLKWSPFATEEELLQNFSNIGPHGTKIIVFNLWSNDDGNLELDFDTNPEDIMISGA
PKPEEISNAVKRTNENHLANRLRYSLRVYTSVLYLELPDYFRIILRGQEVKRHYIATDII
YPECISYKPQICGKQEAEVITTIGFLNGAPTISVHGFNIYHKNRLILPFHRALSSASSKG
RGVAGVLEVDFIKPTHDKQDFEKTQLFQRLMNRLRDMTTEYWDIYCHKIGYGKTPRVRAA
PIPPPPAMLPMENGAAEPLEGTAPAPAVSVPPLRAQGTYVNAVPIAFAPPSFGSAPAGTA
GVAPRAPTGYSPSDTEIMQVNQRTSSSSAPGSDLAGNRKRRDDEITHFNQRISSSLAPGT
DVVGKRKRSDDDAALTVSSRKHATHDLVGSSSAGDQVCHYTRDRELREFSFLKMENRMLC
EECSHFEMQEKELLLKEQELQIQIEQAKEQYTSLLNEYVSAAEAPAPKRTDR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaccgccccaccgacgtgacgacggacgccatggacgcggagagggacatc
aagcccttcttgtccccgacaaccgccacccctatccagcggggcgtccacgggcctggc
acctttcaggcggcggcgcggcaattggagagcggcggcgctcgagtgctaaccggggtg
caaccgcaaactctggcggaagcggcgtgcgccctcaaccgggcagcttcggagctgtcg
ggtggcaccggcgatcggaccagctgcgccaacgaggcattcgagggcacatcggttcgt
cgtccttgccctgcaccacggttcagcaggaagttctggggcgccggcgattacgatgcg
ggggccgggagctctgcgccacagccgagtgtgcagaatcgcatgtgtgttcaccctgaa
tttctccactccaacgcgacttcgcataaatggccatttggggccgtggcagagttattg
gacaacgcggtagatgaggttgaaactggtggtgctacaaaagtaatagtggacaaagtc
atcaacaaccggaacggatcaccagctttgctagttcaagatgatggtggaggcatggat
cctgattccttgaggcgttgcatgagctttggattttcagagaaacaatcaggatcttcg
attggacaatatggaaatggatttaagactagcacaatgcggctcggggaagatgttatt
gttttcagccgttgcacaaagagcggtgggcctactcaatccattggtctcctctcttac
actttcttggtggaaactggccagacagatgttatagttcctgtggtggattacaaatgc
aatctactaagaggacaaactacacgattggagcgacatggttcagagcacttctcctca
aatttgtcagtgttgttgaaatggtccccttttgcaacagaagaagagttattgcagaat
ttcagcaacattggcccacatggcaccaagattatagtgttcaatttgtggtccaacgat
gatggtaatttggagcttgactttgacacaaatccagaggatattatgattagcggtgcg
ccaaaaccagaagagattagtaacgctgtgaaaaggactaatgagaatcatttggctaat
cgactgcgctattctcttagggtgtacacttctgtcttgtatctggagctaccagattat
ttcaggatcatacttcgagggcaagaagttaagcgtcattacattgctaccgacattata
tatcctgaatgcatcagttataaaccccaaatttgcggaaaacaagaggctgaggttatt
acgaccattggattcctaaatggcgctccaacaattagcgtgcatggatttaatatttat
cataagaatcgccttattttgccgtttcatcgagctctgagttctgcaagcagtaaaggt
agaggcgtcgctggagtacttgaggtagacttcatcaagccgactcacgacaaacaggac
tttgagaagacacagctgtttcagaggctgatgaaccgcttgagagacatgactaccgag
tactgggatatttattgtcacaagattggatatgggaaaacgccacgcgtgcgtgcggct
ccaatccctcctcctccagcaatgctcccaatggagaatggtgctgctgaaccattagag
gggactgcacctgcacctgcagtttcagtgccacccttgagagcccagggtacctacgtg
aatgcagttccaattgcttttgcaccccctagttttggctcagcccctgccggaacagct
ggtgttgcaccaagagctcctactggttactccccgtcagacacagagatcatgcaagtc
aaccagaggacctcatcttcctcggctcctggttctgatttggcaggaaatagaaaacgg
agggatgacgagatcacgcacttcaaccagaggatctcatcttccctggctcctggcact
gatgtggtaggcaaaagaaaacggagcgatgacgatgctgctctgacggtttcatctaga
aagcacgccacgcatgatttggtcggcagcagctccgctggtgaccaggtatgccactac
acgagagatcgagagctgagggaattctccttcttgaagatggagaatcggatgctctgt
gaagagtgctcacattttgagatgcaagagaaggagctactgctcaaggaacaggagctg
cagatccagattgagcaggcgaaggagcagtacaccagcctgctgaacgagtacgtctcg
gcggcggaggctccggcaccgaaacgaaccgatcgatag
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