Panicum virgatum (switchgrass): 120711046
Help
Entry
120711046 CDS
T07260
Name
(RefSeq) choline transporter protein 1-like
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120711046
04147 Exosome [BR:
pvir04147
]
120711046
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
120711046
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
120711046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Motif
Other DBs
NCBI-GeneID:
120711046
NCBI-ProteinID:
XP_039852366
LinkDB
All DBs
Position
6K:66358..71485
Genome browser
AA seq
705 aa
AA seq
DB search
MALGGGPLGAIIGRYPSFAAADDQDPGGGVIRHDRKCRDWPFLLLFAAFWVAMIVNSSFG
FNQGNPLRLTFGLDYKGNICGSRHADPDLHELDVRYWMNPNQVYQSGLKSSHINLPDAKA
ICLMECPLPAEDGLNFVCDYPEGDIRLSVDDWIDRDYDYFEFLTPDMRNSSLQLQGPCYP
VIFPSVNVYWSCQFIARASNVSLKHWQQMGGVSIDENMLIDKTIHNAINSKSAVLKRYVA
DIGKSWPVLLLCGGFLPLVLSVIWLLMIRYFVAGMPWITVVVFNALVISVTMFFYIKAGW
IGHDPLTVVIGESDPYVNIGGREINHLHAASVLMTIIMILAFLTSIAIARRILVATSVLK
VAAKVIGEVHALISFPVVPFLILAIFYIFWFLATLHLFSAGQVIRNDCNTDCCSYDLKLG
KVNCDSCCGYSIRYTPHIGIAILFHFLGCYWATQFLIGCSSTIIAGSVASYYWARGEVSH
DIPFRTVVSSLRRTMRYSLGSVALGSLIVSIVEWVRFILETLRRRLKFVNSAHDSWFRKT
VSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASALATGLIMKNVLRIGKVNVIGD
VILMLGKLCVSLLSALFAFIMLDKHKYRSGHNKISSPLVPVLVSWALGYVVAKLFFAVVE
MSIDTIILSFCQDTEEHQGNAQYAPPLLMETLDEESELQRLTEGP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggggggaggccccctcggcgccatcatcggccgctacccctccttcgccgcc
gctgacgaccaagaccccggcgggggcgtcattcgccacgaccgcaagtgccgggactgg
cccttccttctcctcttcgctgccttctgggtcgccatgattgtcaactccagcttcgga
ttcaaccaggggaacccactcaggctgacatttggactggactacaaaggaaacatatgt
ggcagcaggcatgccgatccagatttgcatgagttggatgttcgctattggatgaacccc
aaccaggtctaccaaagcgggctcaaaagcagtcacatcaatctacctgacgctaaagcc
atctgccttatggaatgcccacttccagcagaagatggtttgaattttgtttgcgattat
ccagaaggtgacatacgcctctccgtcgatgattggattgacagggactatgattacttc
gagtttctcacaccagatatgaggaatagttctcttcagctgcagggtccttgttaccct
gtcatctttccaagtgtaaatgtctactggagctgccagtttattgcgcgggcatccaat
gtctctttgaagcattggcagcagatgggtggtgtcagcatcgacgaaaacatgctaata
gacaaaacaattcacaacgcaatcaacagcaaatctgccgtcctcaagagatatgttgca
gatattggaaagtcctggcctgtgttactcctttgcggaggatttctccctctggttcta
tctgtgatctggttactgatgattcgctattttgttgctgggatgccttggataacggtg
gtagtcttcaatgcccttgtaatatctgttacaatgttcttctatataaaagctggttgg
attggccatgatcctttaactgttgttattggtgaaagtgatccttatgtcaatataggt
ggacgggagataaatcatcttcatgccgcttctgtcttgatgacaataataatgatactt
gctttcctgacttcaatagctattgcccggcgcatactggtagctacatctgtcctgaag
gttgctgcaaaggtcattggtgaagtccatgcacttatttcttttccagttgtgccattc
ttgatcctggctatcttctatatattctggtttttagcaacgctccatcttttcagtgcc
ggtcaggttatacgaaatgattgcaatacagattgctgctcgtatgatctcaagcttggc
aaagtaaattgtgacagctgttgtgggtatagtattcgttacaccccacatattggcatt
gccattctttttcattttctcggctgttattgggcaacacaatttttaatcggatgttct
tcgactataattgctggatcagttgcttcgtactactgggcacgtggtgaagtatcacat
gatatcccttttcgtactgtggtatcttccctgaggcgcacgatgcgctatagtcttggc
tctgtggctctcggctcactgattgtgtctattgttgagtgggtgcgatttatactcgag
acacttcgccgcaggctgaagtttgtcaattctgcccatgacagctggtttcggaagaca
gtgtcatcctcatctcagtgctgcttagggtgcattgattggaccctgaaatcagtgaat
cgaaatgcttacatcatgattgccatcacagggaaaggattcttcaaggcttctgcgcta
gcaactgggttgatcatgaagaacgtgttgcgcattgggaaagtgaatgtgattggggat
gtgattctcatgttgggcaagctgtgtgtaagcctgctgtctgcgctgtttgctttcatc
atgttggataagcacaagtacagatctggccacaacaagatatcatcgccgctggttcct
gtgttggtgtcgtgggcgcttggttatgtagtcgcgaagcttttctttgcggtggtggag
atgtcgatcgacaccataatcctgtcattctgccaggacactgaagagcaccaggggaac
gcgcagtatgcgcccccattgctgatggagacgctggacgaggagagcgagctgcaaaga
ctaacagaggggccatga
DBGET
integrated database retrieval system
