KEGG   Panicum virgatum (switchgrass): 120711140
Entry
120711140         CDS       T07260                                 
Name
(RefSeq) U6 snRNA phosphodiesterase-like
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120711140
Spliceosome [BR:pvir03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    120711140
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 120711140
NCBI-ProteinID: XP_039852499
LinkDB
Position
1K:complement(44084300..44086556)
AA seq 280 aa
MDALMANYASDSDSDGGEPAAVPAGDPEIPEPSALLPPPPLELLQPPNFVDYSAMAQGSR
VRSFPHVEGNYALHVYIPVFIPSDAKKQLALAMKRAASLVPDLYAVDADYALSELCKDEH
KLEKVLLSREFHVSLGRPVAVQVHQIDSFIAMLRQKFQSQQQYWMEFNKWEHFVNDDCTR
SFLSLEVTRTGLPEISKQILMVDEIYRLHGLPEFYKNPRPHISLVWALGDISGKLKQAIK
DIEKYQSSMTSLQKCNVRCKFSRVVCKVGKKVHDICKVAD
NT seq 843 nt   +upstreamnt  +downstreamnt
atggacgcgctcatggcgaactacgcgtccgactccgactccgatggcggcgagccggcg
gccgtccccgccggcgatccggagattccggaaccttcggccttgctccctccgcctccc
ctcgaactcctccagccccccaacttcgtagattactcagcgatggcgcaagggagtcgc
gtccggagcttcccccatgtggaaggcaactacgctctgcatgtctacatccctgttttc
ataccttctgatgcaaagaaacagctggcccttgctatgaaaagagctgcatctcttgtg
ccggatctttatgctgttgatgcagactatgcactttctgagttgtgcaaagatgaacat
aagcttgagaaagtgcttctgagcagggagtttcatgtaagcttaggaagacctgttgca
gttcaggtgcatcaaattgactccttcattgcaatgcttcgccaaaagttccagtcacaa
caacagtactggatggagttcaataagtgggagcactttgtcaatgacgattgtacacgg
tcgtttctttcactagaagttacaagaactggtttgccggagataagtaagcagatactt
atggtagatgaaatatatcgattgcatggtcttcctgagttttacaagaatccacggcca
catatttcgttggtgtgggcattgggtgatatcagcggcaaactgaagcaggcaataaag
gacattgaaaaatatcagagcagtatgacctcattacaaaaatgtaatgttcgatgcaag
ttcagtcgtgtagtttgtaaagtaggtaagaaggtgcatgatatctgtaaagttgcagat
tga

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