KEGG   Panicum virgatum (switchgrass): 120711164
Entry
120711164         CDS       T07260                                 
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00020  Citrate cycle (TCA cycle)
pvir00190  Oxidative phosphorylation
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
Module
pvir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    120711164
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    120711164
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     120711164
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA Thi4 FAD_binding_3 HI0933_like
Other DBs
NCBI-GeneID: 120711164
NCBI-ProteinID: XP_039852544
LinkDB
Position
6K:complement(1484832..1489646)
AA seq 619 aa
MWRSCVSRGLSRARASASRLLSTAPSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNT
ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAP
KAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQ
AMKHNTQFFVEYFALDLIMDNEGNCQGVIALNMEDGTLHRFRASNTILATGGYGRAYFSA
TSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERF
MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISET
AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVDIKGDNPDAVVPGLLAAGEAACAS
VHGANRLGANSLLDIVVFGRACANRVADISKPGQKQKPLEKDAGEKTIAWLDKLRNANGS
LPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLISKTWESFHDVKLSDRSLIWNSDLIET
IELENLLINACITMHSAEARKESRGAHAREDFTTRDDEKWMKHSLGYWENEKVRLAYRPV
HMNTLDDEVESFPPKARVY
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtggcgcagctgcgtctcgcggggcctctccagggcgagggcctccgcctccaggctc
ctctccacggcgccgtcgtcctacacggtggtggaccacacgtacgacgcggtggtggtg
ggggctggcggcgcggggctccgggcggcgatcggcctctccgagcacggcttcaacacg
gcgtgcatcaccaagctcttccccacgcgctcgcacactgttgccgcgcagggaggcata
aatgctgcacttggaaacatgactgaagatgattggaggtggcatatgtatgacactgtt
aagggaagcgattggcttggtgaccaggattctattcaatatatgtgcagagaagcacca
aaagctgttatagagcttgagaactatggattgccattttcaagaaccgaagagggaaag
atataccaacgcgcctttggaggacagagcttagattttggaaaaggaggacaagcctac
cgttgtgcctgtgctgctgacagaacaggacatgctatgctacacacactttatggtcaa
gcaatgaagcacaatactcagttttttgtggaatattttgcattagaccttatcatggac
aacgaaggtaactgtcagggagtcattgccttaaacatggaggatggcacccttcaccgt
ttccgtgcttctaatacaattctagccacaggaggttatggcagggcctatttctcagca
acctcagcacacacctgtactggagatggcaatgctatggtcgcacgtgctggtttacct
cttcaagatcttgagtttgtgcagttccatcctacgggcatttatggtgctggatgcctt
attactgaaggttcccgtggtgaaggtggtatccttagaaacagtgagggtgaacggttc
atggaacgatatgctcctaccgcaaaagatcttgcttctcgtgatgttgtttcaagatcg
atgacaatggaaattagagaaggccgtggtgttgggccattgaaggaccacatttatttg
catctgaaccatctgccccctgaggttctgaaggaaaggcttcctggtatttctgaaact
gctgccatttttgctggtgttgatgtcaccaaggagccaattccagttttgcctaccgtg
cactacaatatgggtggtatcccaacaaactaccatggggaggtagtggatatcaagggt
gataatccagatgctgttgttcctggtctgttggctgctggtgaagctgcatgtgcatct
gtccatggtgcaaatcgtctaggcgcaaattcacttcttgacatagttgtttttggcaga
gcttgtgcaaatagggttgccgatatttctaagccaggtcagaagcagaaacctcttgaa
aaagatgctggagaaaagaccatagcctggttggacaaactgaggaatgccaatgggtca
ttgccaacttccaagatccgtctcaacatgcagcgtgttatgcaaaataatgctgctgta
ttccgtacacaagaaactcttgaagaaggttgtaagctgattagcaaaacatgggagagt
tttcatgatgtgaagctcagtgatcggagtctcatttggaactctgacttgatagagacc
attgagctggaaaatctgttgataaatgcatgcataactatgcattcagcggaggctcgg
aaggaaagcagaggagctcatgctcgtgaagatttcacgacaagagacgatgagaagtgg
atgaagcactcactggggtactgggagaacgagaaggttcgcttggcgtacaggccggtg
cacatgaacacattggacgacgaagtcgagtcattcccaccaaaagcgcgtgtgtattga

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