Panicum virgatum (switchgrass): 120711252
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Entry
120711252 CDS
T07260
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120711252
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120711252
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120711252
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120711252
03036 Chromosome and associated proteins [BR:
pvir03036
]
120711252
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120711252
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120711252
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120711252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF349
Motif
Other DBs
NCBI-GeneID:
120711252
NCBI-ProteinID:
XP_039852650
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All DBs
Position
6K:complement(2743634..2747870)
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AA seq
505 aa
AA seq
DB search
MIKQILGRLPKKPAKSGEKELAGAGTSLPSPTADARTTTDLTMSSRLVNPSSYASTVTNP
GQNYAARSAGAGACVSNGFTASAGYEALPSFRDVPASEKPSLFLRKLAMCCVVFDFTDPT
KDVKEKEIKRQTLLELVDYITSATGKFPEPVVQEVIKMVSINLFRAPTPAPRENKVLESF
DLEEEEPVMDPAWPHLQIVYELFLRFIQSPETDAKLAKRYIDHGFIIRLLDLFDSEDPRE
REYLKTILHRIYGKFMVHRPYIRKAINNIFYRIIFETEKHNGIAELLEILGSIINGFALP
LKEEHKLFLVRALIPLHKPKCVAMYHQQLSYCVTQFVEKDCKLADTVIRGLLKYWPITNS
SKEVMFLGELEEVLEATQPAEFQRCMVPLFRQIARCLCSSHFQVAERALFLWNNDHIEGL
IKQNSKVILPIIFPALERNTKGHWNQAVQSLSLNVRKIFMDHDPTLFEECRKKFEEEEAQ
EASKKLKREAIWKRLEEIALSKSAQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaaatcctcggccgtcttcccaagaagccggcgaagtccggcgagaaggag
ttggccggagcgggcacgtcgctgcccagcccgacggccgatgcaagaaccaccacggat
ttgaccatgtctagcaggctcgtcaatcccagcagttatgcctccacggtcacaaatccc
ggccagaattacgcggccaggagcgccggcgctggtgcctgcgtcagcaacgggttcacg
gcctcggccgggtacgaggcgctcccgagcttccgggacgtaccggcgtccgagaagccc
agcctgttcctcaggaagctggccatgtgctgcgtggtgtttgacttcacggacccgacc
aaggatgtgaaggagaaggagatcaagaggcagacgttgcttgagctggtggattatatc
acctctgccacggggaagttcccggagcccgttgtccaggaggtcatcaagatggtgtct
ataaatttgttcagagccccaacccctgctccgagagagaacaaggtgctcgagtcattt
gacttggaggaggaagagcctgtcatggaccctgcatggcctcacttgcagattgtatat
gaactgttcttgagatttattcagtctcctgagacagatgcaaagctggccaagaggtac
attgatcatggttttattatcaggcttcttgatctctttgactcggaggatcctagggag
agggagtacttgaaaacaatacttcacaggatatatggcaagttcatggtgcaccgtcca
tacatcaggaaggcaattaataatatcttctacaggatcatatttgagacagagaagcat
aatggaattgcagagctgttagagattttggggagtataattaatggcttcgctttgccg
ctcaaggaagagcacaaattgtttttggtccgagcattgattccactccacaaaccaaaa
tgtgttgccatgtaccatcagcaactttcatactgtgtcactcagtttgttgagaaagat
tgcaagcttgctgatactgttataaggggtttactgaagtattggcccatcacaaatagc
tcgaaggaggtgatgtttttgggtgagctagaggaggtactagaagctactcagccagca
gaattccagaggtgtatggtgcctcttttccgtcagatcgcccgttgtttatgcagttcc
cattttcaggtggcagagagagctctctttctatggaacaatgaccatattgaaggtttg
atcaaacagaatagtaaggtgatactgcccataatcttccctgcgttagaacgaaataca
aaaggccattggaaccaggcagttcaaagcttgagtctaaatgttcgtaaaatattcatg
gaccatgaccccacactgtttgaggagtgtcgaaagaagtttgaggaagaggaagctcaa
gaagctagcaagaagttgaaacgtgaggctatatggaagcgactagaagaaattgccttg
tcaaaatctgctcagtga
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