Panicum virgatum (switchgrass): 120711321
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Entry
120711321 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT2-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120711321
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120711321
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120711321
NCBI-ProteinID:
XP_039852737
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Position
6K:4030582..4035353
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AA seq
646 aa
AA seq
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MARRVRPSHLVLALGAAYLLLVSLKFHRVLDLAAADLAGGGPAAFSSPSSSDHLPPGAGA
SSHNATATSTRAATAAAFPVQPFWHRYDRVSLPDPAASRGGRTALDRMADDAWALGLAAW
EEAAAFAGDPWALLASATARASDASRCPPAVSQRARGRVVFLPCGLAAGSSVTVVGTPRA
AHREFVPQLARMRQGDGTVMVSQFMVELQGLRAVDGEEPPRILHLNPRLRGDWSQHPILE
HNTCYRMQWGAAQRCDGTPTDDSDDKVDGFPKCEKWIRNDIVGTKESKTTSWLKRFIGRA
KKPAMTWPFPFVEERLFVLTIQAGVEGFHIYVGGQHVTSFPYRPGFTLEEATGLFVKGDV
DVHSVYATALPMSHPSFSLQQVLEMSEKWRSRPLPKRPISLFIGILSASNHFAERMAVRK
TWMQIPEIKSSEVVARFFVALNSRKEVNVMLKKEAEYFGDIVILPFIDRYELVVLKTIAI
CEYGVQNLTAANIMKCDDDTFVRVDVVLRHIKLNNGGKPLYVGNLNLLHRPLRTGKWAVT
DEEWPEDIYPPYANGPGYVISGDIAKFIVSQHANQSLRLFKMEDVSMGLWVEKFNSTKPV
QYSHSWRFCQYGCLENYYTAHYQSPRQMLCLWDKLIRGRASCCNYR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgggtgcggccgtcgcacctggtgctggcgctgggggccgcgtacctcctc
ctcgtctccctcaagttccaccgcgtgctcgacctggccgccgctgacctcgcggggggc
ggccccgccgccttctcctcgccctcctcctccgaccacctgcccccgggcgcgggcgcc
tcctcccacaacgccaccgccacctccacccgcgccgcgaccgccgccgccttccccgtc
cagcccttctggcaccgctacgaccgcgtctcgctcccggaccccgccgcctcccgcggc
ggccgcaccgcgctcgaccgcatggccgacgacgcctgggcgctcggcctcgccgcctgg
gaggaggccgccgccttcgcgggggacccctgggcgctgctcgcctccgccaccgcgcgc
gcctccgacgcctccaggtgcccccccgccgtctcccagcgcgcgcgcggccgggtcgtc
ttcctgccctgcggcctcgccgcgggctcctccgtcaccgtcgtcggcaccccgcgcgcc
gcgcacagggagttcgtgccgcagctcgcgcggatgcgccagggggacggcaccgtcatg
gtctcgcagttcatggtcgagctccagggcctgcgcgccgtcgacggggaggagccgccc
aggatactgcacctcaaccccaggctcaggggggactggagccagcaccccatcctcgag
cacaacacctgctacaggatgcagtggggcgccgcgcagcgctgtgacgggacgccaacc
gacgacagtgacgacaaggttgatgggttccccaaatgtgagaaatggatacgtaatgat
attgttggcaccaaggagtccaaaacaacttcatggttgaagagattcatagggcgtgca
aagaaacctgccatgacatggcctttcccctttgtagaggagaggctatttgttttaact
atacaggctggagttgaaggtttccacatttacgttggtggtcaacatgtgacatctttt
ccatatcgaccagggttcactcttgaagaagcaacaggattatttgttaagggcgatgtg
gatgtacattcagtttatgccactgctcttcctatgtcccatcctagtttttctcttcaa
caagtccttgagatgtcagaaaagtggaggtcccggccactcccaaaacgtcctatttcc
cttttcattggaatattgtctgcgtcgaatcatttcgctgagcgcatggctgtgagaaaa
acatggatgcagattccagaaattaagtcttcggaagtagtagctcgattctttgttgca
ctgaattcaaggaaagaggtcaatgtaatgcttaagaaagaagcagaatactttggagac
attgtcattttgccatttatagatcgttatgagctggtggttcttaagacaattgctatt
tgtgagtatggggtccagaacttgactgctgcaaacataatgaaatgcgatgatgataca
tttgttagggtagatgtggttctgagacacatcaagctgaacaacggtggcaaaccgttg
tatgtggggaacctgaacctcttgcacagaccattgagaactggaaaatgggcagttaca
gatgaggaatggcctgaagatatctacccgccttacgcaaacgggcctggctatgtaatt
tctggtgacatagcaaaattcatcgtatctcagcacgccaaccagagtttgagactattt
aagatggaagatgtaagtatgggtctgtgggttgaaaaattcaattccacgaagcctgtt
cagtattcccacagctggaggttctgccagtacggttgcctggagaactactacacggcc
cactatcagtcacctaggcagatgctgtgcttgtgggataagttgatccgcggtcgggca
tcctgctgtaactacagatag
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