KEGG   Panicum virgatum (switchgrass): 120711337
Entry
120711337         CDS       T07260                                 
Name
(RefSeq) polycomb group protein FIE2
  KO
K11462  polycomb protein EED
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120711337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120711337
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120711337
    PRC2.2
     120711337
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st EIF3I Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd KNTC1_N
Other DBs
NCBI-GeneID: 120711337
NCBI-ProteinID: XP_039852764
LinkDB
Position
6K:4199039..4203169
AA seq 379 aa
MAKLGPGQGLGCEAAEGSLVPSRKREYKPCGKHTEGKRPLYAIGFNFMDARYYDVFATVG
GNRVTTYRCLENGSFAVLQAYVDEDKDESFYTLSWARDHVDGSPLLVAAGSNGIIRVINC
ATEKLAKSFVGHGDSINEIRTQALKPSLIISASKDESVRLWNVHTGICILVFAGAGGHRN
EVLSVDFHPSDIERFASCGMDNTVKIWSMKEFWLYVDKSYSWTDLPSKFPTKYVQFPVLI
AAVHSNYVDCTRWLGDFILSKSVDNEIVLWEPKTKEQSPGEGSIDILQKYPVPECDIWFI
KFSCDFHFNQLAIGNREGKIYVWEVQSSPPVLTARLYNQQCKSPIRQTAVSFDGSTILGA
GEDGTIWRWDEVDHASAKN
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcgaagctgggcccggggcaggggctggggtgcgaggcggcggaggggtcgctcgtg
cccagccggaagcgggagtacaagccctgcggcaagcacactgaggggaagcgcccgctc
tacgccatcgggttcaacttcatggacgcgcgctactacgacgtcttcgccaccgtcggc
ggcaaccgcgtgacaacttaccgttgccttgagaatggtagttttgctgttctacaagct
tacgttgatgaggataaggatgagtcattctacactctaagttgggctcgtgatcatgtt
gatggctcaccacttctggtggcagcaggaagcaatgggatcattcgggtcatcaactgt
gctactgagaagttagctaagagctttgttggccatggtgactcaataaatgagataaga
actcaagcattgaagccttcgctcatcatttctgcaagcaaggatgaatctgttaggcta
tggaatgtccatacagggatctgcatcttggtatttgctggagctggaggtcatcgcaat
gaagtgttgagtgttgacttccaccccagtgatattgagcgttttgcaagttgtggcatg
gataacactgtgaaaatctggtcaatgaaagaattttggctatatgttgacaaatcatat
tcttggactgatcttccatcaaagtttccaacaaaatatgtccaattcccggtcttgatt
gctgcagtacactctaactatgttgattgtacaagatggcttggtgacttcatcctgtcg
aagagtgttgacaatgaaattgtgctttgggaaccaaaaacaaaagaacagagtcctggc
gagggaagcatcgatattcttcagaagtaccctgtgccagagtgcgacatctggtttatc
aaattttcgtgcgattttcactttaatcagttggcaataggaaatcgtgaaggcaaaatc
tatgtgtgggaagtgcagtcaagccctcctgtcctaaccgcccggctatataatcaacaa
tgcaaatctccaataaggcagactgcagtgtcctttgatggaagcacgatccttggagct
ggtgaggatggcaccatttggagatgggatgaagtggatcatgcgagcgccaaaaactga

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