Panicum virgatum (switchgrass): 120711342
Help
Entry
120711342 CDS
T07260
Name
(RefSeq) probable protein NAP1
KO
K05750
NCK-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
120711342
NCBI-ProteinID:
XP_039852768
LinkDB
All DBs
Position
6K:4245080..4263375
Genome browser
AA seq
1358 aa
AA seq
DB search
MAHVSFKNKEVDGGMSRWSEYLNVEEPTPSALASWRNMVADGPQSSSAGGHKHLQMEPVV
QLSKVAEGLLAKMYRLNSILDYPDPNTHTFSDAFWKAGVFPNFPKICMTLSKKFPEHPNK
LQLERVDKFALDALNENAEGYMHNLEQWILLLLDLLAFREQALRLILDLSSTVITLLPHQ
NSLILHAFMDLFCSFVRVNLFSEKVPRKMILQVYNILHVMLKGGRDCEFYHRLVQFVDSY
DPTIKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTKKLRNEGFLSPFHPRYPDILTNSAH
PMRAQDLANVTSYREWVLLGYLVCPDELLRVTSIDVAMVVLKENLILPLFRDEYILLHEN
YQLYVLPKVLESKRIAKSGRTKQKEADLEYNVAKQVEKMLTEVHEQALVSCDAMHRERRI
LLKQEIGRMVLFFTDQPSLLAPNIQMVFSALSLAQCEVIWYFQHVGVASSKSTRGKTVDI
DATDPTIGFLLDGMGKLCCLVRKYIAAIKGYALSYLSSCAGRIRFLLGTPGMVALDLDAT
LKGLFQQVLHCLENIPKPQGETIPAISSDLTDLRKHWLSILMIVTSSRSSINIRHLEKAT
VSTGKEGLVSEGNAAYNWSRCVDELESQLSKHGSLKKLYFYHQHLTTVFRNTMFGPEGRP
QHCCAWLGAACSFPECASAIIPEEVNKIGRDSISYVESLIESIMGGLEGLINILDSEGGF
GSLDMQLSPEQAALRLNSTTRAKGVSSLLTPGHESYPDNSSSIKMLEAAMQRLTSLCSVL
NDMEPICVLNHVFVLREYMRDCILGNFRRRFHSMIRTDNCIQRPSIIESLLRRHLGIIHL
AEQHISMDLTEGICEVLLAESFTGPFPNLQMFETPVGTQGGGSAVEMICNWYIENVVKDA
SHIGVAFDAIQNCFRSSQPIGGGCLAEAFTDKRELKALVRLFGGYGIDKMDKILREHTSA
LLNCIDSALRSNRDALEGLAGSVNSGDRIERDANLKQIIDIETLADLCIQAGQAITFRRL
LVEAVGAVLDEKVPLIYSLLKGLALQLPDEVPDKNEIIRLRRVASSVGVGDKHDAEWVHA
ILAEAGAANDNSWILLPYLCAAFMVSNICSGAVYDVNIGGFSNNLHCLARCISAVVGGSE
YTRVEREQRINSLSNGHTDDLQEAELPSRVSAEASIKSAMQIYVKLSAGIVLDSWNDTSR
PYIVPKLIFLDQLCELSPYLPRSTLEVHIPYTILRSIYHQLYGASLMASEAMDQSPRQSP
LISLAHASPSVRQNRAETTPRSHTFEPSYYSLSGSQHDDGYEVDKRTGQLRSMRRSGPLD
FSASRKVKFVEGSSSGSSHGAGSLQRLAVSRSGPLSYK
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtgtcgttcaaaaacaaagaagtggacggaggtatgtcccggtggtctgag
tacctgaatgttgaagaaccgaccccttctgcattggcaagctggaggaacatggttgct
gatgggccgcaaagttcttctgctggtggccacaaacatcttcagatggaaccagtggtt
cagctgtcaaaagtcgcagaggggttgctggccaaaatgtaccggctgaatagcatcctg
gattatccagatccgaacacgcacacattctcggatgcattttggaaagctggtgtcttt
ccaaatttcccgaaaatttgcatgacactgtcaaagaaatttcctgagcatccaaacaag
ctgcagctggaaagggtagataagtttgctcttgatgctttaaacgagaatgctgaaggt
tacatgcacaatctagagcaatggatcctgttgcttcttgatttgctggcgtttcgtgaa
caagctttgcgacttattttggatttgagcagcacagtcataacattgctgccacatcag
aactctttaattcttcatgcttttatggatctgttttgttcatttgtccgagtcaatctt
ttctctgagaaggtaccaagaaagatgatcctccaggtttacaacatcttacacgttatg
ctaaaaggtggtcgtgattgtgagttttatcaccgattggtacaatttgtggactcttat
gatccaactatcaaagggttgcatgaagatcttaattttgtgagcccgcgaattggagag
gtcctagaagctgttgggccaattatcttcctttcaaccgataccaaaaagttaagaaat
gaaggtttcctcagtccatttcatccacgctatccagacatcctaacaaactctgctcat
cctatgagggcccaagacttggctaatgttacatcataccgtgagtgggttcttctagga
tatcttgtttgtcctgatgaactacttcgggtgactagtatagatgttgccatggttgtt
ctgaaagagaatttaatactccctctgttcagagatgagtacatcttacttcatgaaaat
tatcaactttacgttcttccaaaagttttagaatcaaagagaattgctaaatctggacga
actaagcaaaaggaagctgatctggagtacaatgtcgcaaagcaggttgaaaaaatgtta
acggaagtgcatgaacaagcgctagtgtcatgtgatgctatgcatcgtgaaaggagaatt
cttcttaagcaggaaattggaaggatggttctatttttcacagatcaacctagcctccta
gcacctaatattcagatggtcttttccgctctttcgttggctcaatgcgaggtgatttgg
tacttccaacatgtgggggttgcatcatcgaaatctactcgagggaaaactgttgacatt
gatgcaacggacccaactattggtttcttgttagatggaatgggcaaactttgttgcctg
gtccgtaaatacatagcagcaataaaaggatatgcattatcatacttgtcatcttgtgct
gggagaatacggttcttacttggtactccaggaatggttgctcttgacctagatgcaaca
ctgaaaggcctttttcagcaagtcctccattgtctggagaacattccaaaacctcagggg
gaaactattcctgccatttcctctgacttgactgatttgcgtaagcactggctctccatt
ttgatgattgtcacatcttcaagatcctcgataaacattcggcacttggagaaggctact
gtgtctaccgggaaggagggtttggtgtcggaaggcaatgctgcatataattggtcaaga
tgtgtggatgaacttgagagccaactttccaaacatggaagtcttaaaaaactttacttt
tatcatcagcatctaaccacagtcttcagaaatacaatgtttggtccggaaggccgccca
cagcattgttgtgcttggcttggagctgcttgcagttttccagaatgtgcatctgcaatt
attcctgaagaggttaacaaaattggcagagattctatctcatatgttgagtcccttatt
gagtctatcatgggtggattggaaggattgataaacattctagattcagaaggtggattt
ggctcattagacatgcagctttccccggagcaagcagctcttcggttgaatagcacaaca
agagcaaaaggtgtttcaagcttgttaacgccaggacatgagagttatcctgataatagt
tcatcaattaagatgctggaagctgctatgcagaggctgacaagtttatgttctgttcta
aatgatatggagcctatttgcgttctcaaccatgtttttgttctccgggagtacatgaga
gactgtatcctagggaatttcaggagaagatttcatagtatgattagaactgataactgc
attcagcgaccatcaatcatagaatctcttctaagaagacatctgggcatcatccatcta
gcagagcagcatattagtatggaccttactgaaggtatatgtgaagtgctactagcagag
agttttacaggtccatttcccaatctgcaaatgtttgaaacaccagtgggtacacaagga
gggggatctgctgttgagatgatatgcaattggtatattgagaatgttgtaaaggatgct
tctcacattggagttgcttttgatgcaatccagaattgcttcaggagctcacaacctatt
ggtggtggatgtttagctgaagcatttacagataaaagagaactcaaagcacttgttcgt
ctttttggtggctatggaatagataaaatggataagatactaagggagcatacatctgca
ctgttaaattgtattgattcagcattaaggtcaaatcgtgatgccttggagggtttagct
ggaagtgtaaattctggtgataggattgaaagagatgcgaatctgaagcagattattgat
attgagacattggctgacctctgtattcaggcagggcaggcgataactttccgtcgactg
ttggttgaggctgttggagcggtgcttgatgagaaagtacctctcatatattctctgctc
aaaggattagccctgcagttgccagatgaggtacctgataaaaatgagattattagattg
agaagggttgcgagcagtgttggtgttggtgacaaacacgatgccgagtgggttcacgct
attctggcagaagctggtgcagctaatgataattcttggatcttacttccatatctttgt
gctgcatttatggtgtccaatatttgtagcggtgctgtttatgatgtcaatataggtgga
ttcagtaacaatttgcactgccttgcaaggtgtataagtgctgtggttgggggaagcgag
tacactagggttgaaagggagcagcgaataaattctctttcaaatgggcatacagatgac
ttgcaagaagctgaattaccaagccgtgtctcagcagaagcaagtattaaatctgctatg
cagatctacgtcaaattgtctgcaggcatagtccttgattcatggaatgacactagcagg
ccatacattgtaccaaagctaatattcctggatcaactctgtgagctgtccccgtacctc
cccaggagcactttagaagttcacataccttacaccatcctccgctccatctaccaccag
ctatatggagcgtcactgatggcctcagaagcaatggatcagtccccaaggcagtcgcct
ctgatctctcttgcacacgcctccccatctgtgaggcaaaatcgagcggagacaacaccc
aggtcccacaccttcgagcctagctactacagtttgtcggggtcccagcatgacgacggg
tatgaggtagataagaggaccggacagctgcggagcatgaggcgctcgggaccgcttgac
ttcagcgctagtaggaaggtgaagtttgttgagggctctagctctgggagcagccatggg
gctggctcgctgcagagattggcggtgtcaagatctggccctctgtcttacaaatag
DBGET
integrated database retrieval system
