Panicum virgatum (switchgrass): 120711361
Help
Entry
120711361 CDS
T07260
Name
(RefSeq) tryptophan decarboxylase 1-like
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00350
Tyrosine metabolism
pvir00360
Phenylalanine metabolism
pvir00380
Tryptophan metabolism
pvir00950
Isoquinoline alkaloid biosynthesis
pvir00965
Betalain biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
120711361
00360 Phenylalanine metabolism
120711361
00380 Tryptophan metabolism
120711361
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
120711361
00950 Isoquinoline alkaloid biosynthesis
120711361
00965 Betalain biosynthesis
120711361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120711361
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
120711361
4.1.1.105 L-tryptophan decarboxylase
120711361
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120711361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
SepSecS
Motif
Other DBs
NCBI-GeneID:
120711361
NCBI-ProteinID:
XP_039852787
LinkDB
All DBs
Position
6K:complement(4510724..4512518)
Genome browser
AA seq
508 aa
AA seq
DB search
MGSIDANPAALEAFGGGVDGFQPLNADDVRSYLHKSVDFIYDYYKSVESLPVLPAVEPGY
LRRLLQAAPPTSSAPFDVALKEVREAVVPGMTHWASPNFFAFFPSTNSAAAIAGELIASA
MNTVGFTWQANPAATEMEVLALDWLAQLLRLPASFMSRGTGGGVILGTTSEAMLVTLVSA
RDAALRRIGSDGVAGITRLTVYAADQTHSTFFKACRLAGFDPANIKSIPTGADTDYALDP
AKLLEIMQADVAAGLVPTYICATVGTTSSNAVDPVGAIADVAAVFNAWVHVDAAYAGSAC
ICPEFRHHLAGVERVDSISMSPHKWLMTCLDCTCLWVRDTHRLTGSLETNPEYLKNDASD
SGAVTDLKDMQVGVGRRFRGLKLWMVMRTYGAAKLQEHIRSDVAMARMFEDAVRADDRFE
VVVPRNFALVCFRIKPQGAMTEEDAEAANRELMERLNRTGKAYLAHTAIGGKFVLRFAVG
SSLQEERHVRSAWELIKKTTTEIIKGEM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcattgacgccaaccccgccgccttggaggcgttcggcggcggcgtcgatggc
ttccagccgctcaacgccgacgacgtccgctcctacctccacaagtccgtcgacttcatc
tacgactactacaagtccgtcgagtccctgccagtgctacctgccgtcgagccggggtac
ctccgccgcctgctgcaggccgcgccgcccacctcctccgcgcccttcgacgtcgccctg
aaggaggtccgcgaggccgtggtcccggggatgacgcactgggccagccccaacttcttc
gccttcttcccctccaccaacagcgccgccgccatcgccggggagctcatcgcctccgcc
atgaacaccgtcggattcacgtggcaggccaaccccgccgccaccgagatggaggtgctc
gcgctcgactggctcgcgcagctcctgcgcctgccggccagcttcatgagccgcggcacc
ggcggcggcgtcatcctcggcaccaccagcgaggccatgctcgtcacgctcgtctcggcg
cgcgacgccgccctgcgccggatcggctccgacggcgtcgctggcatcacgaggctcacc
gtgtacgccgccgaccagacgcactccaccttcttcaaggcgtgccgcctcgccggcttc
gacccggccaacatcaaatccatcccgacaggggcagacaccgactacgccctcgatccg
gcgaagctgctcgagatcatgcaggccgacgtcgccgctggcctcgtgccgacctacatc
tgcgccacggtcggcaccacctcttccaacgccgtcgaccctgtgggcgccatcgccgat
gtcgccgccgtgttcaacgcgtgggtgcatgtggacgccgcttacgccggcagcgcgtgc
atctgcccggagttccggcaccacctcgccggcgtcgagcgcgtggactccatcagcatg
agcccgcacaagtggctcatgacatgcctcgactgcacctgcctgtgggtgcgcgacacg
caccggctcaccggctcgctggagaccaacccggagtacctcaagaacgacgccagcgac
tccggcgccgtcaccgacctcaaggacatgcaagtcggcgtcggccgccgcttccgcggg
ctcaagctctggatggtcatgcgcacctacggcgccgccaagctccaggagcacatccgg
agcgacgtcgccatggccaggatgttcgaggacgccgtgcgcgccgacgaccggttcgag
gtcgtggtgccgaggaacttcgcgctggtctgcttcagaatcaagccccagggcgccatg
acggaggaggacgccgaagcggccaaccgcgagctcatggagcgcctgaacaggaccggg
aaggcgtacctggcgcacacggcgatcggcggcaagtttgtgctgcggttcgcggtgggg
tcgtcgctgcaggaggagaggcacgtgcgaagcgcgtgggagctcatcaagaagacgacc
accgagatcatcaagggagagatgtag
DBGET
integrated database retrieval system