Panicum virgatum (switchgrass): 120711442
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Entry
120711442 CDS
T07260
Name
(RefSeq) meiotic recombination protein SPO11-2-like isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120711442
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
120711442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
DUF7281
Motif
Other DBs
NCBI-GeneID:
120711442
NCBI-ProteinID:
XP_039852896
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Position
6K:complement(6057117..6059980)
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AA seq
386 aa
AA seq
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MAAPEADVAAASLFGADRRLCSADILAPAEVRARIEVAVLNFLAALASPSSPAISVLPLI
SRTSANCSLRSSLLSDVSSVYLSYAFCKRSLMRESSAKAFVRVWKVMEMCYKILGEGKLV
HQRELFYKLLSESPKYFSCQRHVNRAIQDVVSLLRCTRQSLGIMASSRGALIGRLVLHEP
DEEQIDCSILGASGHAITGDLNVLGKLNLSSDARYIIVVEKDAIFQRLAEDRLYNQLPCI
LITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYA
CNVKWLGLRGDDLQLIPESAFQELKPRDSQIAKSLLSSKFLQESHRAELTLMVERGKRAE
IEALYSHGFDFLGKYIARKIVQGDYI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggaggcggacgtggcggcggcgtcgctcttcggcgccgaccgccgcctc
tgctccgcggacatcctcgcgccggctgaggtccgggcgaggatcgaggtggcggtgctc
aacttcctcgccgcgctcgcctcccccagctcgccggccatctccgtcctcccactgatt
agccggacctctgccaactgcagcctgcgcagcagcttgctgagcgacgtttcgtcagtt
tatctctcgtacgccttctgcaagaggtctctgatgagagaaagcagcgcaaaggcgttt
gtaagagtatggaaggtcatggagatgtgctacaagatcttgggggaggggaagctggtc
caccaacgggagttgttctacaagctcctctcggagtcgcccaagtacttcagctgtcag
cgccacgtcaaccgagccattcaagatgtagtttccttgctccggtgtacaagacagagc
ctaggaatcatggcatcaagcagaggggcactgattgggcgcctcgtgttgcatgaacca
gatgaagaacagattgattgttccattcttggagcttcagggcatgcaattactggagac
ctgaatgtattgggcaaattaaatttgtcttcagatgctcgctatatcattgtagtggag
aaggatgccatattccagaggctagctgaagaccgcttgtataatcagcttccttgcatc
ctgatcactgcaaaaggatatcctgatattgccacaaggtttatcttgcatcgattgagc
cagacttttccaaatatgccgattttcgcattagtggactggaacccagcagggcttgct
atactgtgcacttacaaatatggaagcatatcaatgggtttggagtcatacagatatgct
tgcaatgtgaaatggcttgggctaagaggggatgatctgcagcttatccctgagagtgca
ttccaagagctgaaaccacgtgattcgcagattgcaaaaagcttgttgtcatcaaagttc
ctacaggagagtcacagagctgagctgacgctgatggtggagaggggcaagcgtgcggag
atcgaagccctctactcccacgggttcgatttcttggggaagtacatcgcgagaaagatt
gtacagggcgactacatctga
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