Panicum virgatum (switchgrass): 120711532
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Entry
120711532 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 8-like
KO
K03355
anaphase-promoting complex subunit 8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120711532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120711532
03036 Chromosome and associated proteins [BR:
pvir03036
]
120711532
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120711532
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120711532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC8
TPR_1
TPR_2
TPR_8
TPR_11
TPR_17
TPR_19
TPR_7
TPR_14
TPR_12
TPR_16
TPR_CcmH_CycH
ANAPC3
ARM_TT21_C
ARM_TT21_N
ChAPs
TPR_9
TPR_15
PPTA
TPR_MalT
RPN7
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
120711532
NCBI-ProteinID:
XP_039853026
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All DBs
Position
1K:44524276..44528567
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AA seq
599 aa
AA seq
DB search
MASAKEAYRAELRAAARQLGERCLYSAAKWAAELLVGVDMDAAPAPSAAIDSPSSSSAAS
AGRLLHLHRSGGSSFRHRPRPGCGSTSEAGTPLGGVSYVSTPIPDDDAFDAGGDKYLLAK
TYFDCREYRRAAHVLQNQAGRKAVFLRCYALYMAGEKRKEAEMIELEGSLGKSNAVNQEL
VDLERELSTHRRTGSIDSFGLYLYGLVLRDKGCEGLARTILVESVNSYPWNWSAWSELQS
LCTSSDILNNLNLKNHWMKDFFLASTYLELKMHEEALERYERLMGVFRCSGYIQAQIATV
QYSMRDLDEAEMIFEELLRTDPFRVDSMDIYSNLLYAKESLTALSFLAHRVFLTDKYRPE
SCCIIANYYSLKGQHEKSVLYFQRALKLNRKYLSAWTLMGHEYVELKNTPAAIDAYRRAV
DINPRDFRAWYGLGQIYEMMGMPFYALYYFQKSSYLQPNDARLWIAMAQCYESDPLQMIE
EAIKCYKRAANSNDTEGIALHQLAKLHDMLGQSEEAAIYYKKDLVKMELEERQGQNFVEA
LLFLAKHYKSIGNFEEAEHYCTRLLDYTGPEKETAKNMLQGIKRLQSGFPSMDIDHFAL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagccaaggaggcctaccgcgccgagctccgcgccgccgcccgccagctcggc
gagcgctgcctctactctgccgccaaatgggccgccgagctgctcgtcggcgtagacatg
gacgcggccccggccccgtcggccgcgatagactcgccgtcctcctcgtccgcggcctcc
gcagggcggctgctgcacctgcaccgcagcgggggttccagcttccgccaccggccccgc
cccggatgcggcagcacctcggaggctgggaccccgctgggcggcgtgtcgtacgtcagc
acgcccattcccgacgacgacgcgttcgatgcgggcggtgacaagtacctgctcgccaag
acctacttcgactgtcgggagtaccgccgcgccgcgcacgtgctgcagaaccaggctggg
cgcaaggctgtgttcctgcgatgctacgcgctctacatggctggagaaaagaggaaagag
gcagagatgatagagcttgaaggatcgttgggcaagagtaatgctgttaatcaggaacta
gttgatttggagagagaactgtcaacacatcggagaactggctctattgattcatttggg
ctctacttgtatggccttgttctacgtgataaaggatgcgaaggtctagctaggacaatt
ttggtagaatctgtcaacagctacccttggaactggagtgcttggtcagagttacaatct
ttatgcaccagcagtgacattctaaataacttaaatttgaagaatcactggatgaaagac
ttctttctagccagtacatatctggaactaaagatgcatgaagaagctctggaaagatat
gagcgcttgatgggggtcttccgctgcagtggctacattcaggctcaaattgcaacggtg
cagtatagtatgagggacctggatgaagcggagatgatttttgaagaactgctcaggact
gatcctttccgtgtggattctatggatatttactcaaatttactatatgcaaaagaaagc
ttgactgctttgagtttccttgcacacagagtatttttgacggataaataccgcccagaa
tcttgctgcataattgcaaattactacagtctgaagggccagcatgagaaatcagttttg
tactttcaaagggcactaaagctcaatcgaaagtacctctcagcttggacccttatggga
cacgagtatgttgagctgaaaaatactcctgctgcaattgatgcctacagaagagctgtt
gatattaatcctagagatttccgtgcttggtatggtcttggtcaaatctatgagatgatg
gggatgccattttatgcactttattacttccagaaatcgtcatatctgcaacccaatgat
gcccgtctctggattgccatggctcagtgttatgaaagtgatccacttcaaatgattgaa
gaagccatcaagtgctataagagggctgcaaatagcaatgacactgaaggaatcgcactt
catcaactagcaaagttacatgacatgctagggcagtctgaggaagctgcaatctactac
aagaaggatttagtgaaaatggagcttgaggaaaggcaaggccagaattttgttgaagct
ctgcttttccttgctaagcattacaagagcataggcaatttcgaggaagcagagcactat
tgtacaaggctcttggactacactggtcctgagaaggaaactgctaaaaatatgttacaa
gggataaaaaggttacagtcggggtttccatcaatggatattgaccattttgcactgtaa
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