Panicum virgatum (switchgrass): 120711571
Help
Entry
120711571 CDS
T07260
Name
(RefSeq) transcription factor TGAL6-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120711571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120711571
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120711571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
120711571
NCBI-ProteinID:
XP_039853077
LinkDB
All DBs
Position
6K:complement(8417119..8425436)
Genome browser
AA seq
446 aa
AA seq
DB search
MELYPGYLEDHFNIHKLNRLQPLAASGAHPGRYADAAAAAGPGAMGIYGRQRHQMAAVGA
WGDPFRPDGDALAAPLAAVAPVTVAAAADVVETESKLGTRLAQHDVVAVEEAPPSSDSFG
HDDARPRDKTQRRLAQNREAARKSRLRKKAYIQNLETSRMKLARLEQELAMARRQQVRPP
PRAPNNSGEQAKPLLMSSDPPLQGAHAGGGGVLAPAVADPRVAAFEVEYARWVEEQEKQA
EELRAALQPGGALAPAQELQLRLLVDAAVAHYGALFEARARAARADAFFVLSGVWRAPAE
RFFLWIGGFRPSELLKVLAPRLGPLPEPQASAVRALQNTARQLEDALSQGMAKLQQTLVD
ALMTVDAPDGGAGGYAARQMASAVGKLDDLVSFVDQADHLRQLTLRNMSEILTVPQAARG
LLALADYSQRLRALSSLWAARPREPA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagctttaccctggatatcttgaagaccatttcaacatccacaaactcaaccgcctg
cagccgctggcggcgagcggcgcccacccgggccggtacgcggacgcggcggcggcggcc
ggcccgggggccatggggatctacgggcgccagcgccaccagatggcggcggtcggcgcg
tggggagacccgttccggcccgacggcgacgcgctggccgcccccctggccgccgtcgct
ccggtgacagtggcagcggcggcggacgtcgtcgaaacagagtccaagctcggcacacgc
ctggcgcagcacgacgtcgtcgcggtggaggaagcgccgccgtcgtcggatagcttcggg
cacgacgacgccaggcccagagacaagactcagaggcggctggcgcagaacagggaggct
gctcggaagagccggctgaggaagaaggcctacatccagaatctcgagacgagccggatg
aagctggcgcggctggagcaggagctcgccatggccaggcgccagcaggtaaggccacct
cctcgagctcccaacaattcaggagagcaggcaaagccattgctgatgagctccgatccg
ccgctgcagggcgcgcacgccggcggaggcggggtgctggcgccggccgtggcggacccg
cgcgtggcggcgttcgaggtggagtacgcgcggtgggtggaggagcaggagaagcaggcc
gaggagctgcgggcggcgctgcagccgggtggcgcgctggcgccggcgcaggagctccag
ctgcggctcctcgtcgacgccgcggtggcgcactacggcgcgctgttcgaggcccgggcg
cgggcggcccgcgcggacgccttcttcgtgctctccggcgtgtggcgcgcccccgccgag
cgcttcttcctctggatcggcggattccgcccctccgagctgctcaaggtcctggcgccg
cggctgggcccgctgccggagccgcaggcctcggcggtgcgcgcgctgcagaacacggca
aggcaactggaggacgcgctgtcgcagggcatggccaagctgcagcagacgcttgtcgac
gccctcatgaccgtcgacgcgccggacggcggcgccggagggtacgccgcgcggcagatg
gccagcgccgtgggcaagctcgacgacctcgtcagcttcgtggaccaggcggaccacctc
cggcagctgacgctgcggaacatgagcgagatcctgacggtgccgcaggcggcgcggggg
ctcctggcgctcgccgactactcccagcggctgcgcgcgctcagctcgctctgggcggcg
cgcccgcgggagccggcgtag
DBGET
integrated database retrieval system
