Panicum virgatum (switchgrass): 120711576 Help Entry 120711576         CDS       T07260                                  Name (RefSeq) vacuolar sorting protein 18-like   KO K20181   vacuolar protein sorting-associated protein 18 Organism pvir  Panicum virgatum (switchgrass) Pathway pvir04142   Lysosome biogenesis pvir04145   Phagocytosis pvir04148   Efferocytosis Brite KEGG Orthology (KO) [BR:pvir00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     120711576    04142 Lysosome biogenesis     120711576    04148 Efferocytosis     120711576  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pvir04131]     120711576 Membrane trafficking [BR:pvir04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     120711576    Hops complex     120711576 SSDB OrthologParalogGFIT Motif Pfam:  Pep3_Vps18 VPS18_solenoid_2nd VPS18_solenoid_1st VPS18_RING_C Clathrin zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 zf_RING_Vps8_fungal Nup54_57_C zf-RING_UBOX Beta-prop_VPS8 DUF4704 zf-rbx1 zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  120711576 NCBI-ProteinID:  XP_039853084 LinkDB All DBs Position 6K:8500770..8509363 Genome browser AA seq 993 aa AA seqDB search MDGGGGQLFSVDPLERQAARGHGAVTSMAAGSDVIVLGTSRGWLVRHDYTFEDAHDLDLG SGRSGDHSVHRVFLDPGGKHCVATVVHPGGAETYYHHARWPRPKPLPRLRGLLVNAVAWN RQSITEASTKEVILGTESGQIFEMAVDEADKREKYVKPLFQLTEQREGIKDLQMETAVVG NSTRYYVMAVTPTRLYSFTGIGSLETVFTSYSDRAIHFMELPGEIPNSELHFFIKQRRAK HFGWLSGSGIYHGELNFGAQHSSTSGDENFVENKGFFDYSKLGDSGTKPRSFALSEFHFL LLIGDKIKVVNRISQQMVEELVVDNTPETSRGIIGLCSDASTGLFYAYDESSIFQISTSD EGRDMWQVYLDMNHYAAALSHCRNPFQRDRVYLVQADAAFAAKEHFIAASFYAKMNYILS FEEISLKFISIGEQDALRTFLLRRLDNLTKDDKMQITMISTWATELYLDKINRLLLEDST GSTTNSVAEPNSSEYRSIVNEFRAFLSDSKDVLDEATTMRLLESYGRVDELVYFAGLKEQ YEIVVHHYIQQGEARKALEVLQRRNVPVDLVYKFAPDLIMLDAYETVESWMMVRNKLNPG KLIPAMMRYVSEPHAKNETHEVIKYLEFCVKDLENKDPGVHNLLLSLYAKKEDESQLLQF LDTKFGKGQTNGPEFFYDPKYALRLCLQEKRMRACVRIYSMMSMHEEAVALALKVDLELA KAEADKVEDDEELRKKLWLKVAKHVIEQEKGVKRENIKKAIEFLSETNNLLKVEDILPFF PDFVLIDDFKEEICKSLKDYNSQIELLKQEMDDATRGADNIRSDIGALAQRYTVIDREQD CGVCRRKILTVGGLHQVGRSYTSVGHMAPFYVFPCGHAFHANCLIGHVTRCSSQTHAERI LDLQKRLSLMDRKAAKDNGANVNGESIMSTTPVDKLRSQLDDAVASECPFCGDLMIKEIS QPFILPGESDEKASWDIKPQPTPQKILPMTMSI NT seq 2982 nt NT seq  +upstreamnt  +downstreamnt atggacggcggcggcggccagctcttctccgtggacccgctggagcgccaggccgcgcgg ggccacggcgccgtcacctccatggccgccggcagcgacgtcatcgtcctcggcacctcc cgcggctggctcgtccgccacgactacaccttcgaggacgcgcacgatctcgacctcggg agcggccgctccggcgaccactcggtgcaccgggtgttcctggaccccggcggcaagcac tgtgtcgccacggtggtccacccgggcggcgcggagacgtactaccaccacgcaaggtgg ccgcgccccaagccgctcccccgcctccgcggcctcctcgtcaatgccgtcgcctggaac cgccaatccatcacggaagcatcgaccaaggaggtgatcctgggcaccgagagcgggcag atcttcgagatggccgtggatgaggccgacaagagggagaagtatgtgaagccgctcttc cagctcactgagcaaagagagggcatcaaggatctccagatggagactgctgtggttgga aattccacaaggtactatgtgatggccgtcactccaacacggctttactcgttcacaggc attggttcattagaaactgtttttactagttactccgatcgtgccatacactttatggag ctcccaggagaaatacctaacagtgagttacatttctttatcaagcaaagaagagctaaa cactttggatggctttctggatctggaatttatcatggtgaactgaattttggagcgcaa cacagctctactagtggagacgagaactttgtggaaaataagggtttttttgactactca aaattgggagattctggaactaaaccaaggtcatttgcattgtctgaattccattttctg cttctgattggggacaagattaaggtagtgaacagaataagccagcagatggtggaggaa cttgtagttgataatacacctgaaacttcaagaggaatcattggcctctgtagtgatgca tctacaggacttttctatgcatatgacgaaagttctatattccagatttccacttctgat gagggtcgtgacatgtggcaagtttacttggatatgaatcattatgctgctgctttatca cattgtcgcaaccctttccagcgggaccgagtctatctagtgcaggctgatgctgcattt gctgcaaaagagcatttcatagcagcttccttctatgcaaagatgaattatatcctatcg tttgaggagatcagcctgaagtttatatcaataggtgagcaggatgctctcagaactttc ttgttgagaaggctcgacaacctcaccaaagatgacaagatgcagattacgatgatctca acttgggctactgagctgtacttagacaaaattaatcgcctcctgttggaagatagcact ggcagcactacaaattctgtagcagagcctaatagctcagaatatcgttcgatagtaaat gaattccgtgcttttcttagtgacagcaaagatgtattagatgaagcaacaacaatgaga ctattggaaagttatggaagagtggatgagctagtgtactttgctggtttgaaggagcaa tatgaaattgtggttcatcattacattcagcaaggagaagcaagaaaagcattggaagtg cttcaacggcgcaatgttcctgtagaccttgtgtataaatttgccccagatttaatcatg ttagatgcttatgagactgttgaatcatggatgatggtgagaaacaagttgaatcctggg aaactcataccagcaatgatgcgttatgtgagcgaaccacatgcgaagaacgaaacacac gaggttattaaatacctagaattttgtgtgaaagatttggagaacaaggaccctggagtg cataatctgttgctatcactgtatgccaagaaggaagatgaatcccagcttttgcaattt ctcgacactaaatttggtaaaggacaaacaaatggccctgaattcttttatgatcccaag tatgctctccgcctatgtcttcaagagaagagaatgcgtgcttgtgttcgtatttacagc atgatgtccatgcatgaggaagctgtggcacttgctttaaaggtagacttagaacttgca aaggcagaagctgacaaagtagaagatgatgaagaacttaggaagaagctgtggcttaag gttgcgaagcatgtaatcgagcaagagaaaggtgtcaagagagaaaatataaagaaagca atagaattcctttcggagaccaataacttgttaaaggttgaggatatcttaccatttttc ccagacttcgtattgattgacgacttcaaggaggaaatatgcaaatctctcaaggattat aacagccagattgagctgctgaaacaggaaatggatgatgccacacgtggggcagacaat atcagaagtgatattggtgccctcgctcagagatatactgtaattgatcgtgagcaggat tgtggggtttgccgccgtaaaatattgactgttggagggttacaccaggtaggaagaagc tacacgtctgttgggcacatggccccgttttacgtgtttccctgtggacatgccttccat gcgaattgcttgattggacatgtaactcgttgcagtagccagacgcatgctgagagaata ttggaccttcagaaacggcttagcttgatggatagaaaagcagcaaaagacaatggagca aatgttaatggtgaatctattatgagcacaaccccagttgataagctaaggtcacagttg gatgatgctgtagcaagcgagtgccctttctgcggtgacctgatgatcaaggagatttcg cagccattcattctccctggagagtcagatgaaaaggcatcatgggatattaaaccacaa ccaacgcctcagaagattctgcccatgaccatgtctatatga

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