Panicum virgatum (switchgrass): 120711593
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Entry
120711593 CDS
T07260
Name
(RefSeq) mRNA cap guanine-N7 methyltransferase 1-like
KO
K00565
mRNA (guanine-N7-)-methyltransferase [EC:
2.1.1.56
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120711593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120711593
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.56 mRNA (guanine-N7)-methyltransferase
120711593
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120711593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_G-N7_MeTrfase
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
MetW
NNMT_PNMT_TEMT
TPMT
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
120711593
NCBI-ProteinID:
XP_039853116
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Position
6K:complement(8712198..8715827)
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AA seq
369 aa
AA seq
DB search
MNKRPRDDPSSSFASEPKRPYGAGGGYGAQQGYTEERSSARRVADHYSARSNQTLEEREN
SPIIHLKKLNNWIKSVLIQLYARPGDCVLDLACGKGGDLIKWDKAKVGYYVGVDIAEGSI
KDCMTRYNGDTDQQRRKKFSFPARLICTDCYEARLDEYLYEDAPFDICSCQFALHYSWST
EARARQALANVSALLRPGGIFIGTMPDANVIIKRLRESEGLEFGNSVYWISFGEEYAEKK
FPASRPFGIKYKFHLEDAVDCPEWVVPFHLFKLLVEEYDLELVLMKNFHEFVHEYLQKPE
FTELMRRLGALGDGRHDQSTLSQDEWEVSYLYLAFVLRKRGQPPGQRRSSNTNRGKMFLN
EGDIEFLGI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgcccccgcgacgacccgtcctcctccttcgcctccgagcccaagcgcccc
tacggcgcaggcggcgggtatggcgcgcagcagggctacacggaggagcgtagcagcgcg
cggcgggtggcggaccactacagcgcgcgctccaaccagacgctcgaggagcgcgagaac
agccccatcatccacctcaagaagctcaacaactggataaagagcgttctgatccagcta
tacgcacgcccgggcgactgcgtgctcgatctcgcttgcgggaagggaggtgatttgata
aagtgggacaaagccaaggttggctattatgtgggtgttgatattgccgaaggctcgata
aaggattgcatgactcgctacaatggtgatacagatcaacagcgcaggaagaagttcagt
tttcctgcacgacttatttgcactgattgttatgaggctcgtctggacgagtatttatat
gaggatgccccatttgacatatgtagctgtcagttcgctttacattattcatggtcaact
gaagcacgcgctagacaagccttggcgaatgtgtctgcattgcttcgccctggaggcatt
tttattgggacaatgcctgatgctaatgtcattattaaaaggcttcgagaatctgaaggg
ttggaatttgggaacagtgtttattggattagctttggtgaagagtatgctgaaaagaaa
ttccctgcatccaggccttttggtatcaagtacaagtttcacttagaggatgctgtcgat
tgtccagaatgggttgttccattccatctcttcaaattactggtagaagagtatgatctc
gagctggttctgatgaagaacttccatgaattcgtacatgagtacttgcaaaagccagag
tttactgaactgatgcggaggttaggtgcccttggtgatggaaggcatgaccaaagtaca
ctgtcccaggatgagtgggaagtttcctatctctatcttgcttttgtcctgcggaagcga
gggcaaccgcctggccaacggagatccagcaatacaaacagaggcaagatgttcctcaac
gagggcgatatcgagtttctcgggatatag
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