Panicum virgatum (switchgrass): 120711594
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Entry
120711594 CDS
T07260
Name
(RefSeq) histone-lysine N-methyltransferase ATXR3-like
KO
K22748
[histone H3]-lysine4 N-trimethyltransferase ATXR3 [EC:
2.1.1.354
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00310
Lysine degradation
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120711594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120711594
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
120711594
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120711594
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDG2_C
GYF_ATXR3
SET
GYF_2
GYF
F-box-like
Motif
Other DBs
NCBI-GeneID:
120711594
NCBI-ProteinID:
XP_039853117
LinkDB
All DBs
Position
6K:8720151..8731828
Genome browser
AA seq
2275 aa
AA seq
DB search
MGDGGVACAVRAVEGFGASALVRRGGAGEAMPDKGEKGHGHQHQQHHQQHRKSQQPASAA
ELEEGELLNGEPETNGLPERSMPPKKWRKVLAASTAAAEVEPGEIVSTKQAVPLKKARRN
GEVEKGELVPERQRKDRSSGKSASTSATARKSSKDEVEPGEIALPEKRRDSKSQRGDDNG
RKPSSSVQKGSLRDSDEEPGEIKPESSSTGSARKSRPTEPQSINHKHQADTSDQSGSKNR
RKEEGRSSSAGRHLSGRNREVSPLTRDRHDRHERSPGILGRFPHDRFRHDRYDRSPSRLE
RSPHRERARYYDSRDRSPYISPRHRARQPHFRDSTPSRVDNSPRGRAQHENFRDRSPFRH
DRSPSERSRATDSHEAIKKNRNCSSSEKPQHKSKSTKQSSKTKSGSNGKTNEKISKEKAT
ESTHTELPPPPPLPPPPPPPPPPPPLPPVVPPPLPPPPEPEPNGVLAEDMIEDMDICDTP
PHTSAAPEPAEPICDIGRWFYLDHFGIEQGPSKLADLKKLVEDGYLLSDHLIKHADSNRW
VTVENAASPLVPSDFPSLYSDASTQLVSPPEAPGNLLDEALEAASNLASGAEDKQMEEAC
GEHSEDFYIDDRVEALMDGSILVPGQELEIIGELLGANFKPADWERWSRPEDFRRFQIHL
GGDDGINRGTEFLDNRPTDTYGLVSVEKNNFHHHVESSEWFSGRWSCKGGDWKRNDELSQ
DNPFRKKLVLNEGYPLCQMPKGSHEDPRWHRKDELYYPVRAKKHDLPFWAFSSTEEDTDS
ASDTCKSVVSGRPGQSRQPPRGVNGMMLPVVRINSRVVKDQSSVKDQSSVEPRTKPRGAD
RPLSRSSRSHSIGTERSSVHEGSSHFKKHHDHDSQGLHKSKSVPNIPKDRVCTADELSVN
RGDWYYLDGTGHEHGPFSYSELQELVKKGTIVERSSVFRKIDNTWFPVLKDLKPLCSVPS
VAQSSNSTAAHMQSDQYNVGVNKGSGCFHELHPQFVGYTRGKLHELVMKYFKSRELTLAI
NEVLDPWISTKQPKKEFEAYFSHNSASRNFLPEDGGSTKRAKLLPDQSDEDIHLSDDILA
SRKEDICFEELCAGSASVDDDSVNPSTENGSWGLLNGSVLARIFHFMRADVKSLISSAAT
CRSWNAAAKYYRNMCRFIDLSSVGALCTDSVFCDIMGGYVKQNIRTLVLTGCSNLSSHTL
GKVLEQLPHISFVHIQGCNHLGDLKNKFQHVTWIRSSLSSEESHQKTKTMKQISDGNNYP
SKVSRNFTNQLDGSDELDGYFADISNRENANLSFGQGFYKRSKLLDARKSSAILSRDAQM
RRLMQRQAENSYRKMQEFVINRLREIMKSNRFEFFIPKVAKIEVRLKNGYYARHGFHTIK
HDIRSMCQDALRYKDGNDSGDIKQIVVSFIQLAKRLGNPRFISERNGAAAQDSLDISQYS
SDTKLKKKQNKMRGANSVAVGVDPSRAFDREIKRSLSKLKKKNVDSGSETSDDDDGYSEG
DETESETTVSDTESDVDVHSGAWDLKGNSLKLLEPSESVTDDRILGGRMTKASLVPPVTR
KYEVIEEYLIVADEEEVQRKMRVALPDDYSEKLLSQKNGTENLELPEVKDYQPRKVPGDE
ILEQEVYGIDPYTHNLLCDIMPADLDLSPTDKHIFIEELLLNTLNKQVRHFTGSGNTPMT
YNLRPVIEEIQRSAEECGDRRASKMCLGMLKAMRNRPDQNCVAYRKGLGVVCNKKGGFGE
DDFVVEFFGEVYPSWRWYEKQDGIKHIQNNSEDQAPEFYNIMLERPKGDRNGYDLVFVDA
MHKANYASRICHSCNPNCEAKVTAVDGKYMIGVYTLRPIAEGEEITFDYNSVTESKEEHE
ASICLCGSQVCRGSYLNFSGEGAFEKVLMDFHGVLDRHSLLLQACEANSVSQQDLFDLGR
AGLGTCLLAGLPGWLVAYTAHLVRFIYLERQKLPDEILKHNVEEKRQFLIDINMDSEKND
AEVQAEGVLNSRLQQIVHTLDKVRYVMRCIFGDPKNAPPPLVRLTGKNLVSAIWKGDCSI
VAELLQSMEPHVEEEVLSDLKAKIRAHDPSDSEDIEGGIRNSLLWLRDELRTLSCTYKCR
HDAAADLIHMYAYTKCFFRAREYKTVKSPPVHISPLDLGPKYADKLGPGFQEYCKTYPED
YCLAQLIYWYSQNSEPESRLTRARKGCLSLPDVSSFYVKSAKPGQERVYGNRTVRFMLSR
MEKQAQRPWPKDRIWVFKSDPRFFGSPMMDAVLNNSPLDKEMVHWLKTRPTVFLG
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgggggagtcgcgtgcgccgtccgtgcagtcgagggcttcggtgccagcgcc
ctcgtgaggagaggaggagcgggagaagcgatgccggacaagggggagaaaggccacggc
caccagcaccagcaacatcaccagcagcaccggaagagccagcagccggcgtcagctgcc
gagctggaggagggggagctgctcaatggggagcctgagacgaacgggctgcccgagagg
agcatgccacctaagaagtggcggaaggtgctggcggcctcgacggctgctgcagaggtg
gagcctggggagattgtcagtaccaagcaagcggtgccgttgaagaaggcaaggaggaac
ggggaggttgagaagggggagttggtgccggagcgccagaggaaggacaggtcttccggg
aagagcgccagcaccagcgccaccgccaggaagtcgagcaaggatgaggtggagccaggg
gagattgcactgcctgaaaaaaggcgggatagcaagtcccaacgaggcgatgataatggc
aggaagccaagttcatctgtccagaaaggctccttgcgggactctgatgaagagcctggt
gaaattaagccagagagcagcagcactggtagtgcaaggaagagccggccgacagagcct
cagagcattaatcacaagcaccaagctgacacctctgaccaatcagggtcaaaaaatcgc
aggaaggaagaagggaggagttcgtctgctgggagacatttgtctgggagaaatcgtgag
gtctcaccgctaacgcgggaccgacatgataggcacgagaggagcccaggaatcttgggc
cgttttcctcatgatcgattccgtcatgacaggtacgacaggagcccgagccgcttggag
cgctctccacatcgagagcgtgctcgttattacgatagcagagaccgcagtccatacatt
tcacctcgtcatagagctcgtcagccccacttcagggatagcacgccaagtcgtgttgat
aattcccctcgtgggagggctcagcatgagaatttcagagaccgtagtccatttcgtcat
gacagatcaccttctgaacgttctcgggctactgacagccatgaagcaatcaagaagaac
agaaactgcagcagctcagaaaaaccacagcacaagagcaaatcaacgaagcaatcttca
aagaccaagagtggtagcaatgggaagaccaatgagaaaatttcaaaagaaaaggcaact
gagagcactcacactgagctgccaccgccacccccactaccgccgccgccgcctccaccg
ccgccacctccacctctgccacctgtcgtaccacctccattgcctccaccaccagaaccg
gagccaaatggagttcttgcagaagatatgatagaagacatggatatctgcgacacccca
cctcacactagcgcggcacctgaacccgctgaaccaatttgtgatatagggaggtggttt
tatcttgatcacttcggtatcgagcaaggaccttccaagcttgctgacttgaagaaactg
gtggaagatggatatcttctttctgatcatctgataaaacatgctgatagcaatcgatgg
gtgactgttgagaatgcagcttcaccactggtcccatccgacttcccctctttatattca
gatgcttcaacacaactggttagcccaccagaagctccaggaaatttgcttgatgaagct
ctggaggcggcttctaacttggcatcaggtgctgaggataaacaaatggaggaagcttgt
ggagaacatagtgaagatttctacattgatgatagagttgaagcactgatggatggatca
attttggtacctggccaggagctcgagatcattggagagcttttaggtgcaaattttaaa
cctgctgattgggaaagatggagtcgacctgaagattttaggaggttccaaatacatctt
ggaggagatgatgggatcaatagaggcacagaattcctagacaacagaccaacagacact
tacggcctggtttctgtggagaagaacaactttcaccatcatgttgaatctagcgaatgg
ttttctgggagatggtcttgcaaaggtggtgactggaagagaaatgatgaattgagccaa
gataatccattcaggaaaaaacttgttctcaatgaaggctatcctctgtgtcaaatgcca
aaaggtagccatgaggatcctcgctggcaccgcaaggatgagctatactaccctgtacgt
gctaaaaagcatgacctaccgttttgggcattctcatcgacagaagaggacactgacagt
gccagtgacacctgtaaaagtgttgtgtctgggaggccaggtcagagcagacaacctcct
aggggagtgaacgggatgatgcttccagtggttaggataaattctcgtgttgttaaagac
caatcatctgttaaagaccaatcatctgttgaaccccgtacaaaacccagaggagccgat
cggccactgtctagatcttcacgctcccattcaattgggactgagagaagttctgtccat
gaaggttcatcgcatttcaagaagcatcatgaccatgattcccaaggtttgcacaaatcc
aagtctgttccaaacattccaaaggaccgtgtatgtactgctgatgaattgtcagttaat
cggggtgactggtattaccttgatggcactgggcatgagcatggtccattttcttactcc
gaattgcaagaattagttaaaaagggcactattgttgaacggagcagtgttttccgtaag
attgataacacatggtttcctgtacttaaggatttaaaacctctctgctctgtacctagt
gtggcacaaagttccaattctaccgctgctcatatgcagtcagatcaatataatgttggt
gtgaataaaggatcaggttgcttccatgagttgcacccccagtttgtgggttacacacgt
ggtaaattgcatgaattagtcatgaaatatttcaagagcagggaacttactttagctata
aacgaggtcttggatccttggatttcaacaaagcagcccaaaaaggaatttgaagcatat
ttttctcacaattcagcatctaggaatttcctgccagaagatggtgggtctacaaaaagg
gcaaagttgctgcctgaccaaagtgatgaagatattcacttgtcggatgacattcttgcc
agtcggaaggaggatatttgttttgaagagttatgtgctggatctgcttctgtcgatgac
gattctgtgaatcctagcacagaaaatggaagttggggtctcctaaatggcagtgtgtta
gcaagaatcttccattttatgagggcagatgtgaagtcacttatttcttctgcagctacc
tgcaggagctggaatgctgctgccaagtattacaggaacatgtgtagatttattgatctg
tcttctgttggcgctctttgcactgattctgtgttttgtgatattatgggtggttatgtg
aagcaaaatattaggactcttgttttaactgggtgttcgaatcttagctcccataccctt
ggcaaagtacttgagcagcttccgcacatatcttttgtgcacatccaaggttgcaatcat
ctaggggatctgaaaaataaatttcagcatgtaacatggatcaggagctcgttgagttct
gaggagtcacaccagaaaacgaaaaccatgaagcagataagtgatgggaacaactaccca
tcgaaagtttcaaggaactttactaatcagctggacggttctgatgagcttgatggttat
tttgctgatatttcaaatagagagaatgctaatctttcatttggacaaggtttctacaag
cgatcaaaattgcttgatgctagaaagtcctctgccattttgtcaagagatgcacaaatg
aggcgtttgatgcagaggcaggctgagaacagctacaggaagatgcaagaatttgtcata
aacagactcagagaaatcatgaagagtaacagatttgaatttttcattccaaaggttgct
aagatcgaagttaggttgaaaaatgggtattatgctcgccatggctttcataccatcaag
catgacatccgttctatgtgccaagatgcattgagatacaaagatgggaatgattcggga
gatataaagcaaattgttgtctccttcatacagctagccaagaggctagggaacccaagg
ttcatttctgagagaaatggagcagcagcccaggacagcctggatattagtcagtattcg
tctgacacaaaactcaaaaagaaacaaaacaaaatgaggggagcaaattcggtagctgtt
ggagtagatccatctcgtgcatttgatcgggaaatcaaaagaagcctatctaaattaaag
aaaaagaatgtcgactctggtagtgaaacatctgatgatgatgatggctattctgaaggt
gatgaaactgagagtgaaactactgtttctgataccgagagtgacgtagatgtacattcc
ggagcatgggatttaaagggaaatagtctaaagttactcgaacccagcgaatccgtgact
gatgatcgtatcttgggtggccgcatgacaaaagccagccttgttcctccagttactagg
aagtatgaagttatcgaggagtaccttattgtagcagatgaggaggaagtacaacgaaaa
atgcgggttgctttacctgatgactattctgagaagttgctctcgcagaagaatggcact
gaaaacttggagcttccagaggttaaggattatcagcctagaaaagtaccaggagatgaa
attcttgagcaagaagtatatggcatagatccatacacacacaatctactgtgtgacatt
atgcctgctgatcttgacttgtcacctactgacaagcatatctttattgaggagttgctt
ctgaacacgttgaataagcaagttaggcatttcactggttcgggaaatacccctatgact
tacaatctcaggcctgtcattgaagaaatccaaaggtctgcagaggaatgtggtgacaga
cgagcttcgaagatgtgcttgggaatgctgaaggccatgaggaatcgtcctgatcagaac
tgtgttgcttatagaaagggtcttggtgttgtctgtaacaaaaaaggtggatttggtgaa
gatgactttgttgttgagttctttggggaggtttacccttcttggagatggtatgaaaag
caagatggtatcaagcatatacaaaacaacagtgaagatcaagctcctgagttttacaac
attatgttagaaaggccaaagggagaccgaaatggatatgacttggtttttgttgatgca
atgcacaaggccaactatgcaagtaggatctgccactcctgcaacccgaactgtgaagca
aaagtgacagctgtggatgggaaatacatgattggagtttacactcttcgaccaattgca
gaaggcgaggaaatcacatttgattacaattctgtaactgagagcaaagaagaacacgaa
gcttcgatctgcctttgtggaagtcaagtatgccggggcagctatttaaatttttccggt
gaaggagcttttgagaaggtgttaatggatttccatggtgtgctcgatcggcatagcctg
ctgctacaggcgtgtgaagcaaactctgtctctcaacaagacttattcgacttgggtaga
gctggtcttggtacctgtttgcttgctggtttacctggatggcttgttgcttacacggct
cacctggtgcggtttatatacctcgagagacagaaactccctgatgagatcttgaagcac
aatgtggaggagaagcgccaattccttatagacataaacatggattctgagaagaatgat
gctgaggttcaggcagagggagttttaaattcaagattacagcaaatagtgcatacactt
gacaaggtgagatatgttatgagatgcatatttggggacccaaagaatgctcctcctcct
ctagtaaggttgactgggaaaaatctagtatctgccatctggaaaggggactgttcaata
gttgctgaactccttcagtcgatggaacctcatgttgaagaggaggtacttagtgatctc
aaggccaaaattcgtgctcatgacccttcggactctgaagatattgagggaggcatccgg
aattctctcctatggttgcgtgatgagttgcgtactctttcatgcacttacaagtgccgt
catgatgctgctgcagatttgattcacatgtatgcttatacgaagtgttttttcagagca
cgggaatataagacagtaaaatctccaccggttcatatcagtccgcttgacttaggtccc
aaatatgctgataaactgggaccaggcttccaggagtactgcaagacatacccagaagat
tactgcttagcccagcttatctattggtatagccagaattcagaacctgaatctagattg
acaagagctagaaaaggttgcttgtctttaccagatgtctcgtccttctacgtgaagtct
gcaaagccaggacaagagcgagtttatggcaacaggaccgtgagattcatgttatcacgc
atggaaaagcaggcacagagaccatggccgaaggacagaatatgggtgttcaagagcgac
ccgagattctttggtagtcctatgatggacgccgtgttgaataattccccgctcgacaag
gagatggtgcattggctcaagacaagaccaaccgttttcctaggctag
DBGET
integrated database retrieval system
