Panicum virgatum (switchgrass): 120711610
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Entry
120711610 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120711610
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120711610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120711610
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120711610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
bCoV_NS7B
Motif
Other DBs
NCBI-GeneID:
120711610
NCBI-ProteinID:
XP_039853135
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Position
6K:complement(8988080..8989444)
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AA seq
307 aa
AA seq
DB search
MGTITCELESSYAATAGAGAGKARLDGKLGVPPREQRWFAFAGDSKGKGRRLGGGGRGGA
ADGSWYGGRFLRRRTGGGMQVFVRTLGGRSLALDVSPSDTVDAVKAWVQARERVAAADQR
LVFAGRELGDGRRTLAEYGVGKEANLFLHRRLRGGAGGGAGAAGSRRATTAAAGVLAAVV
AIGAALAYFSVPAAAAAAAAGASGMTLSLAVLLLAWALAMAGVNLITAGVFLAGRAETVR
CAVQSAVVGKASAFVRRNLAVVGVAAASSAATGVIFGGGDRTLCFVSFALFLVAMSLVTI
GVANCAR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccatcacgtgcgagctggaatcgtcgtacgccgccacggccggcgccggcgcc
ggcaaggccaggcttgacggcaagttgggcgtcccgccgcgcgagcagcgctggttcgcc
ttcgccggcgacagcaagggcaagggcaggaggcttgggggcggcggtcgaggcggcgct
gcggacggatcatggtacggcggccggttccttcgccgtcgaaccggcggcggcatgcag
gtcttcgtgaggaccctgggcgggaggagcctggccctggacgtcagcccgtcggacacc
gtcgacgcggtgaaggcctgggtccaggcgagggagcgcgtcgcggcggcggaccagcgc
ctcgtcttcgccgggagggagctcggtgacggccgccgcaccctcgccgagtacggtgtc
gggaaggaggccaacctgttcctccaccgccgcctccgcggcggcgctggaggaggcgcc
ggcgccgccggctcgcgccgggcaacgacagcagccgccggcgtcctcgccgccgtggtc
gcgatcggcgcggcgctcgcctacttctcggtcccagctgcagctgcggcggcggcggca
ggcgccagcggcatgaccctgtccctcgccgtcctcctcctcgcgtgggcgctcgccatg
gccggagtgaacctgatcacggccggcgtcttcctggccggcagagccgagactgttcgg
tgcgccgtgcagtccgccgtggtcggcaaggcgtccgcctttgtccgccggaacctcgct
gtcgtcggagtcgcggctgcctcgtcggcggcgacaggagtcatcttcggcggcggtgac
cggacactctgtttcgttagctttgctctgttcctggtcgccatgtctctcgttaccatc
ggcgtagcgaactgtgctcgctga
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