Panicum virgatum (switchgrass): 120711677
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Entry
120711677 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit C-2-like
KO
K08066
nuclear transcription factor Y, gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120711677
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120711677
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-X
ABC_trans_aux
CENP-W
Motif
Other DBs
NCBI-GeneID:
120711677
NCBI-ProteinID:
XP_039853216
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Position
6K:complement(10163606..10166214)
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AA seq
238 aa
AA seq
DB search
MDMEKQPSETTVNQGMTNGDTPAALASVSPSAGTSIAPASQDAPVDPVIQPHSLDQNQVA
SQQTHNSHQQQQLQAFWSGQLDESKQTTDFKTHSLPLARIKKIMKADSDVPRIAGEAPVL
FAKACEMFIQELTLRAWFHADEDKRRTLKKNDVTAALSGTEVFDFLVDTGPSDKLKGDGA
VLPTTTTVQEEDDDPYRDYCWDDYSPPWSPDDSPGPDLRNVTCDDPRYYTYIHEYYSL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggacatggagaagcaaccctcagagactacggtgaatcaaggtatgacaaatggtgat
acccctgcagcattggcatctgtatcaccatcagcaggcacctccattgctccagcgtca
caggatgctccagtcgatccagtcatccagcctcattccttagatcagaaccaggttgca
tcccagcagacccataatagccatcagcagcaacagctccaggccttctggtccggccag
ctggacgagagcaagcagacaactgatttcaagacccacagccttcccctggcaaggatc
aagaagatcatgaaagccgattccgatgtcccaaggatcgcgggtgaggcaccagtgttg
tttgccaaggcttgtgagatgttcatccaggaactaacactgcgggcgtggtttcatgcc
gacgaggacaagaggaggacgctgaagaagaatgatgtcactgccgcactatcagggaca
gaagtctttgatttcttggtagacaccggtccatcagacaaacttaagggtgatggagcg
gttttgccaacgactacaaccgtgcaggaggaggatgacgatccctatcgtgactactgc
tgggatgattactctcccccctggtcccctgatgactcccctggccctgacttgcgcaat
gtgacttgtgatgacccaagatactatacttacatccatgaatactattctctgtga
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