Panicum virgatum (switchgrass): 120711798
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Entry
120711798 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6-like
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120711798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120711798
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120711798
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120711798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
120711798
NCBI-ProteinID:
XP_039853375
LinkDB
All DBs
Position
6K:complement(12612313..12616807)
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AA seq
492 aa
AA seq
DB search
MAAAAAAVRAAAVAVLSVAVLCGAAQAIGVNWGTQLSHPLPASTVVRLLQDNGFDKVKLF
DAEDAILGALKGSGIQVMVGIPNDMLADLAAGGKAAEDWVAKNVSGHVRDGVDIRYVAVG
NEPFLETFNGTYLNTTFPAMQNIQAALVKAGLADKVKVTVPLNADVYQSPTGKPSDGDFR
GDIHGLMLTIVQFLASTGAPFVANVYPFISLYTDPNFPLDYAFFQGSSSPVVDGGVTYQN
TFDANHDTLVAALRRNGFGNVSVVVGEVGWPTDGDANANLDYARRFNQGFLAHIAGGQGT
PLRPGPVDAYLFSLIDEDRKSIQPGNFERHWGIFNYDGTPKYALSLAGGGNGSAALTLKP
ARGVQYLEKRWCVLKPSADLADQKVGDSVGYACGLADCTALGYKTSCGGLDARGNVSYAF
NSYYQTMDQDDRACDFRGLAAATSVDPTAGTCRFIVQIDVGAAAAISSARGVAGGVASSA
LAALVLMSSMLL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggctgtgcgcgccgcggcggtggcggtgctgtcagtggcggtg
ctgtgcggcgcggcgcaggcgatcggcgtgaactggggcacgcagctgagccacccgctg
ccggcgagcacggtggtgcggctgctgcaggacaacggcttcgacaaggtgaagctgttc
gacgccgaggacgccatcctcggcgcgctcaagggctcgggcatccaggtcatggtcggc
atccccaacgacatgctcgccgacctcgccgccggcggcaaggccgccgaggactgggtc
gccaagaacgtctccggccacgtccgcgacggcgtcgacatcaggtacgtggccgtgggt
aacgagccgttcctggagacgttcaacgggacgtacctgaatacgacgttcccggcgatg
cagaacatccaggcggcgctggtgaaggccggccttgccgacaaggtgaaggtgacggtg
ccgctgaacgccgacgtgtaccagtcgccgacggggaagccgtcggacggcgacttccgc
ggcgacatccacggcctgatgctcaccatcgtgcagttcctggcgtccacgggcgcgccg
ttcgtggccaacgtgtacccgttcatcagcctgtacacggaccccaacttcccgctggac
tacgccttcttccagggctcgtcgtcgccggtggtcgacggcggcgtcacctaccagaac
accttcgacgccaaccacgacacgctggtggcggcgctccgccggaacgggttcggcaac
gtgtcggtggtggtcggcgaggtcgggtggccgacggacggcgacgccaacgccaacctc
gactacgcgcggcgcttcaaccaggggttcctcgcccacatcgccggcggccagggcacg
ccgctgcggccgggccccgtcgacgcctacctcttcagcctcatcgacgaggaccgcaag
agcatccagccgggcaacttcgagcgccactggggcatcttcaactacgacggcacgccc
aagtacgcgctcagcctcgccggcggcggcaacggctcggctgcgctgacgctcaagccg
gcgaggggcgtccagtacctggagaagcggtggtgcgtgctcaagccgtcggcggacctc
gccgatcagaaggtcggcgacagcgtcggctacgcgtgcgggctcgccgactgcacggcg
ctcgggtacaagacctcctgcggcggcctcgacgccaggggcaacgtttcctacgccttc
aacagctactaccagaccatggaccaggacgaccgcgcctgcgacttcaggggcctcgcc
gccgccacctccgtcgaccccacggcggggacgtgccgcttcatcgtccagatcgacgtc
ggcgccgccgcggctatcagctccgccaggggcgtcgccggaggcgtggccagctccgcg
ctcgccgcgctcgtgctcatgtcgtccatgttgctctga
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