Panicum virgatum (switchgrass): 120711801
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Entry
120711801 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 homolog A-like
KO
K03032
26S proteasome regulatory subunit N2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120711801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120711801
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120711801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
120711801
NCBI-ProteinID:
XP_039853384
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All DBs
Position
6K:12628395..12633484
Genome browser
AA seq
1053 aa
AA seq
DB search
MAPPGSHIFAAGPPRLSSPANPPSSSAPSKARSKAPAKSNRLRTRRKRAAAHPRGHRGGG
SAPADMAAAAVTVSSAGSLLAMLQEPAPELKLHALACLNSLVHAFWHEISTSVSSIESLY
EDEEFDQRQLAALVASKVFFHLGELNDALSYALGAGALFDVADDSDYAQTLLAKALDEYA
AIQSRAAGEEKTMDPRLEAIVERMLDKCILDGKYQQAMGMAVECRRLDKLEAAISRCDNL
HGALSYCINLSHQYVSHREYRLEILRCLVKIYQTLPNPDYLSICQCLMFLNESDTVASIL
DKLISGSKDDALLAYQTAFDLAENENQAFLLNVRNHLDALSSAHANPDSTPALPSDQAAN
AATEPSGDVQMGDDVNMPNGSALTVDPNKVAHADRLTKIKNILSGETSIQLTLQFLYSHN
KSDLLILKTIKQAVEMRNSVCHSATICSNAIMHAGTTVDTFLRENLEWLGRATNWAKFSA
TAGLGVIHRGHLQQGRALMAPYLPQNGAIGSASPYSEGGALYALGLIHANHGEGIKEFLR
ESLRNTSSEVVQHGACLGLGLAALGTADEEICEDIKTVLYTDSAVAGEAAGIGMGLLMVG
TASEKATEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGM
YALALAYRGTANNKAMHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSES
YNPHVRYGAALAVGISCAGSGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMIQANESYD
SRVGAFRRKLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIKLKSKSKHDRLTAVVGL
AVFTQFWYWYPLTYFISLAFSPTALIGLNSDLKVPKFEYLSNAKPSLFDYPKPTTQQTAT
TSVKVPTAILSTYAKAKSKAKKDAESKAKEKAEMVPPSEDASAASTSMQVDGAAAEKKAP
EPEPTFQLLTNPARVIPAQEKFIKFLEESRYEPVKAAPSGFVLLRDLKPTEAEELALTDP
PSTATANNANTTEQAAMAIDEEPQPPPAFEYTS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcctggatcccatatatttgcggcggggcccccgcgcctctcctccccagcg
aatccgccatcttcttctgctccaagcaaggcccgcagcaaagcgcccgcgaaatccaat
cgcctgcggaccaggaggaaacgcgccgccgcacacccgagaggacaccgcggcggcgga
tcggcacccgcggacatggcggcggcggcggtgacggtgagctcggcgggctcgctgctg
gcgatgctgcaggagccggcgccggagctcaagctgcacgcgctcgcctgcctcaactcc
ctcgtccacgccttctggcacgagatctccaccagcgtctcctccattgagagtttgtat
gaagacgaggagtttgaccagaggcagcttgcagcactagttgcttccaaggtgtttttc
cacttgggcgagctaaatgacgctctgtcatatgcacttggtgctggagccctgtttgat
gttgctgacgactccgattacgctcaaacacttctagcgaaagctttggatgaatatgct
gccatccaatcaagggctgcaggggaagaaaaaacaatggacccaagattggaggccatt
gtggaaagaatgctggacaagtgcattcttgatggaaaatatcagcaggcaatgggtatg
gctgttgagtgcaggagactggataagcttgaggccgcaatttctcgatgtgataatctt
catggagctctttcgtattgcatcaatctgtctcaccaatatgttagtcatcgtgaatat
cgattggagattctgcggtgtcttgtaaaaatataccagacattgccaaatccggattat
ttgagcatttgccagtgtcttatgttcttgaacgagtctgacactgttgcaagcatcttg
gacaagcttatttctggaagcaaggatgatgctctccttgcgtatcaaactgctttcgat
cttgctgaaaatgaaaatcaggctttcctcctgaatgtgcggaatcaccttgatgcattg
agttctgcccacgctaaccctgacagcacaccagctttaccaagtgatcaggctgctaat
gctgctacagaaccatctggggatgtccagatgggagatgatgtgaacatgccaaatggc
agtgctctcactgtggatccaaataaagtagcacatgctgatagacttacaaaaatcaag
aatatactgtcaggagagacatctattcagttgacattacagtttctatacagccataat
aagtctgatcttttaattctgaagactataaagcaagctgtggaaatgaggaacagtgtc
tgtcacagtgcaacaatatgctccaatgctatcatgcatgcagggacaacagtagatacc
ttcctcagagaaaacttggaatggcttggtagggcaaccaactgggctaagttcagcgcc
actgctggactaggtgtcattcatagaggccatcttcaacaaggtcgtgcattgatggct
ccttacctacctcagaatggtgctattggtagtgctagtccatactcggaaggaggtgcc
ctttatgctcttggtttgattcatgccaaccatggtgaaggaatcaaagagtttcttcgt
gaaagtcttcgcaacaccagttctgaggtagtccagcacggtgcttgtttgggactcgga
cttgcggcattaggtacagcagatgaggaaatatgcgaggacatcaagactgttctgtac
actgatagtgctgtggccggcgaggcagctggtattggcatgggcttgcttatggttggc
acggccagtgagaaggccacagagatgcttgcctatgctcatgatacacaacatgagaaa
attatcaggggcttgtcacttggaattgcattgacagtgtatggtagggaagaggaagct
gacaccttgattgaacaaatgactagagatcaagaccccatacttcgttatggtggtatg
tacgcattggctctagcgtacaggggaactgcaaataacaaagctatgcaccagcttctg
cattttgctgtgtcagacgtgagcgatgatgtgcggaggactgcagtattggctcttggc
tttgttctgtataacgagcctgagcagacacccagaatcgtgtccctgctatcggaatca
tacaatccacatgtccgttatggtgcagctctagctgttggaatctcctgcgccggatcc
ggattgagtgaagccatctccttgctggagcctcttacatcagacgtcgttgactttgta
cgccagggtgctctcattgccatggcaatggtgatgatccaggccaatgaatcatatgat
tcacgtgttggagcattcaggcgcaagttggagaagatcattctagacaagcatgaggac
accatgagcaaaatgggtgccatactggcttcaggtatcctggatgctggcggcaggaac
gtcaccatcaagctcaagtcgaaatcaaagcatgacaggctcactgctgttgttggactg
gctgtcttcacccagttctggtactggtacccactgacatacttcatcagccttgccttc
tccccgacagcccttattggcctcaattctgatctgaaagtgccgaagtttgagtacctg
tcgaacgctaagccatcgctgttcgattatcccaaaccgacaactcagcagactgcgacc
acatcagtcaaggtgccaacagccatcttgtcaacatatgccaaggcgaagtctaaggca
aagaaggatgcggagagcaaggccaaggagaaggctgagatggtgccacctagcgaggat
gcttctgctgcttctacttccatgcaggtggatggtgctgctgcagaaaagaaggctccc
gagccagagccgacgttccagcttctgacgaacccggcccgtgtcatcccagcccaggag
aagttcatcaagttcctggaggagagccggtatgagcccgtgaaggccgcgccgtccggg
ttcgttctcctgcgcgacctcaagcccaccgaggctgaggagctggccctcaccgacccc
ccctcaaccgccactgcaaacaacgccaacaccaccgagcaggctgccatggccatcgac
gaggagccccagccgcccccggcctttgagtacacctcgtga
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integrated database retrieval system
