Panicum virgatum (switchgrass): 120711805
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Entry
120711805 CDS
T07260
Name
(RefSeq) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ-like
KO
K02372
3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
4.2.1.59
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00780
Biotin metabolism
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir01240
Biosynthesis of cofactors
Module
pvir_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120711805
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120711805
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120711805
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
120711805
Lipid biosynthesis proteins [BR:
pvir01004
]
Fatty acid synthase
Component type
120711805
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Gene cluster
GFIT
Motif
Pfam:
FabA
MaoC_dehydratas
ApeI-like
FAS1_DH_region
4HBT
Motif
Other DBs
NCBI-GeneID:
120711805
NCBI-ProteinID:
XP_039853388
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All DBs
Position
6K:complement(12671508..12674048)
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AA seq
220 aa
AA seq
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MEAAAVPRSAAICRAAPAVPAARARALALPRRARSASAPAPRRLVLAARRAADGDSVETA
PEAVPIEKRFPAFPSVMDINQIREILPHRFPFLLVDRVIEYKAGEYAVGIKNVTINDNFF
PGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRDNFFFAGIDKVRFRKPVIAGDTLI
MRMTLTKYQKRFGLAKMDGKAYVGGDLVCEGEFLLVSATE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgccgtgcccagatccgcggccatctgccgcgccgcgccggcggtcccg
gccgcgcgcgcccgcgccctggccctgccccgccgcgcgcgctccgcgtcggccccggcg
ccgcgccgcctcgtcctcgccgcgcgccgcgccgccgacggcgacagcgtcgagacggcg
ccggaggcggtccccatcgagaaaaggttccctgccttccccagcgtcatggacatcaac
cagatccgcgagatcctcccccacaggttcccatttcttttggttgatagagtaattgaa
tacaaggctggagaatatgcagtggggatcaagaatgttacgataaatgataacttcttc
ccaggacatttccctgaacgccccataatgcctggtgttctcatggttgaggctatggct
caggttgggggtctggtgatgctgcaacctgaagttggtggatctcgagacaacttcttt
tttgcagggattgacaaagttaggttccggaagccagtgattgctggggacacattgatc
atgagaatgactctgacaaagtaccagaagagatttggactcgcaaagatggatggaaaa
gcttatgttggtggtgacctagtttgtgagggggagttcctccttgtcagtgcaactgaa
tag
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