KEGG   Panicum virgatum (switchgrass): 120711983
Entry
120711983         CDS       T07260                                 
Name
(RefSeq) uncharacterized protein LOC120711983 isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120711983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120711983
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     120711983
SSDB
Motif
Pfam: RPC5 FliL
Other DBs
NCBI-GeneID: 120711983
NCBI-ProteinID: XP_039853597
LinkDB
Position
6K:19000786..19045812
AA seq 681 aa
MATGGDKPPSLDADVDMADLASLDAPAASSAAAAGAPSTRFRPRAKGKPKPKPEAPKPEP
LAVPKSEPDPEPEPVPEPLAAPAPPPEDDRVDAMEVDGAGDAAGPGEGAEEEAEAEEEDF
VVREIDVYFTPKPFDDDTKLYIMQYPLRPCWRPYELNEICEEVRVKPLSSEVEVDLSVNK
QSENYDQEAPLGLTKQTLSSSKAEDVSDYAVGVLKGNLVHLNHIDAVVQMRPSMSHVISG
RAYNRQALQSREMNGGASGSKAPSRKGDERPEDSKDHAEDSQPWISLTYQPTGSNIASKY
HDKMISNEGVPIDFTMSNSDYVMSLCPGVSTSSKHINKCQAIREMLLLPLEERLKKWFTE
VSEVNQYDALKHLAPTYSEEEILKVLPDYAYLVRGLWVCKSSLLFDDGYASKRDRILLEF
TKRESIPEKILQVWIKPDDLRRKRILVPLCKRRGVLKDYKFISSDLSFLKRYPHIVNEQE
SAWSTHEMTIRESLEVSNKVARNTRNLTRPNVASKGPNPNMSKGRDGPAQGSDDHATVLG
TVFTANKVRSMQAVVRDLRQLAAKYASNRKDGSKLQALSKAAKDCASLPHDKLKQSISLV
AVDVHDVYVAKHEEKSSIRNILIALFRKKEPNATLTKQEILASAAKYLKREITDKEYHQA
VTEVCISTEDGHLVLKSGDEP
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcgaccggcggggacaagcccccgtccctcgatgccgacgtcgacatggccgacctc
gcctccctcgacgccccggccgcctcatccgccgctgcggccggcgccccctccacccgc
ttccgccccagggccaagggcaagcccaagccgaagcccgaggcccccaagcccgaaccg
ctggccgtacccaaatcagagccggatcccgaaccggagccggtgccggagcccttggcc
gcccccgcgccgccgccggaggatgatcgcgtggacgctatggaggtcgacggggcgggg
gacgctgctggtcccggagagggggcggaggaggaggcggaggcggaggaggaggacttc
gtggtgcgcgagatcgatgtgtacttcacccccaagcccttcgacgacgacactaagctg
tacattatgcaatatcccctgaggccatgttggcgcccatatgagttaaatgaaatatgc
gaagaggttcgcgtgaagccattgagttcagaagttgaagttgatttaagtgtcaataaa
cagagtgaaaattatgaccaagaggcacctttgggactgacaaaacagacactttcatca
tcaaaagcagaagatgtttctgattatgcggttggagttcttaaaggcaacttggttcat
ttaaatcatattgatgcagtggtgcaaatgcgaccatcaatgtcacatgtaatttctggt
cgagcatataataggcaggctttacaatctcgggaaatgaatggtggtgctagtggttca
aaggctccatctcgtaagggagatgagcgcccagaagattccaaggaccacgcagaagat
tctcagccatggatttctctcacataccagccaacagggagtaatattgcaagcaagtac
catgataagatgatatcaaatgagggtgttcctattgatttcacaatgagcaactctgat
tatgtaatgtccttgtgtcctggagtctcaactagcagcaagcatattaacaaatgccaa
gcaataagggagatgcttttgctaccacttgaagaacgcctgaaaaaatggttcactgag
gtttcagaagtaaaccaatatgatgctctgaagcaccttgctcctacctattcagaggaa
gaaatcctgaaagtccttccagactatgcatatttagtgcgtggtttatgggtctgcaaa
agttctttgttgtttgatgatggatatgcttccaaaagagacagaattcttcttgaattt
acaaaaagggagtccatccctgagaaaattctacaagtatggataaaaccggatgacctt
aggaggaagaggatactggttccattgtgtaaaagacgtggagttctgaaggactataaa
tttatatcctcagatttgtcctttctcaaacgctatcctcatatagtcaatgaacaagag
tctgcttggtccactcacgagatgactatccgagagtctcttgaagtgtccaataaagtg
gcacggaataccaggaatttgaccagacctaatgttgcttctaaagggcccaatccaaat
atgagcaagggtagggatggccctgctcaaggaagtgatgaccatgcgactgttttgggt
actgttttcactgccaacaaagttcgcagcatgcaggcagttgttagagacttgcgtcaa
ttggctgcaaaatatgcttccaatagaaaggatggatcaaaactgcaagctctgtccaag
gctgcaaaagattgtgcatcactccctcatgataagctcaaacaatcaatatctctagtt
gctgttgatgttcatgatgtctatgttgcaaagcatgaggagaagtctagtatacggaac
atactcattgctctcttccgtaagaaagaacccaatgcaacattgaccaagcaggaaatt
cttgcttctgctgcgaagtatttaaaaagagagattactgataaggagtaccatcaggcc
gtgactgaagtctgcatttctactgaagatgggcacttggttttgaaaagtggtgacgag
ccctga

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