Panicum virgatum (switchgrass): 120712035
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Entry
120712035 CDS
T07260
Name
(RefSeq) myosin-11-like
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120712035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120712035
04131 Membrane trafficking [BR:
pvir04131
]
120712035
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120712035
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120712035
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120712035
mRNA cycle factors
P-body specific factors
120712035
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120712035
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120712035
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120712035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
CbiA
AAA_19
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120712035
NCBI-ProteinID:
XP_039853654
LinkDB
All DBs
Position
6K:complement(20324632..20335689)
Genome browser
AA seq
1530 aa
AA seq
DB search
MGTKVNIIVGSHVWAEDPAICWVDGEVVKINGEEAEIQATNGKKIVANLSKLYPKDMEAA
AGGVDDMTKLSYLHEPGVLQNLAIRYELNEIYTYTGNILIAVNPFQRLSHLYDPHMMQQY
KGAPFGELSPHVFAVADVAYRAMINENKSNAILVSGESGAGKTETTKMLMRYLAYLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPQEEVEKYKLGSPKTFHYLNQSNCYELVGVSDAHEYL
ATRRAMDIVGISTQEQDAIFRVVAAILHIGNIEFSKGKEVDSSVLKDEKSKFHLETTAEL
LMCNPGALEDALCKRVMVTPEEVIKRSLDPYNATVSRDGLAKTIYSRLFDWLVDKINSSI
GQDASSKCLIGVLDIYGFESFKSNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFQRHKRFVKPKL
SRTDFTICHYAGEVLYQSDQFLDKNKDYVVAEHQELLSASKCSFISGLFPPLPEETSKSS
KFSSIGARFKQQLQALMDTLNSTEPHYIRCVKPNNVLKPAIFENVNVMQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGILAPEALEGNSTDEKAACKKILEKKGLAGFQIGKTKVFL
RAGQMAELDARRTEVLSAAAKTIQGKMRTHIMRKKFLSLRKASVCVQAIWRGRLACKLYD
NMRREAAAIKVQKNQRRHQARRSYKLQYASVLVVQTALRAMAARNEFRFKKQSKAAVTIQ
ARYRCHRAHSYHRKLKCAAIVAQCRWRGRIARKELKKLKMEARETGALKEAKDKLEKKVE
ELTWRVQLEKRLRTDLEEAKAQELSKLQSSMEALQAKLEESNTMLIKEREAAKTIVEAPP
VVQETQVVVQDTEKIDSLTTEVQELKNSLQSEKQRAEDLEKKRSEEEQANEEKQKRLEET
EIKMRQFQDYLRRLEEKLANVESENKVLRQQAVSMAPSKILSGRSKSNLQRSSENVQVSS
NDPKIILESNNTSSPKKEYDIDDKPQKSLNEKQQENQDLLIRCIAQHLGYAGNRPVAACI
IYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNEVLAYWLSNASTLLLLLQRTLKAS
GSTGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGSMVSGVETLRQVEAKYPALLF
KQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLMKGSSRSNTNTAAQQALIA
HWQGIVKSLGNFLNILKVNNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEHWCYRATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQ
QLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNPVSNSFLLDDDSSIPFSVDDISK
SMQQIDISDIEPPPLIRENSGFVFLLPPPE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggggactaaagttaatataattgtgggctctcatgtgtgggctgaggaccctgctatc
tgctgggtcgatggagaggtggttaaaatcaatggcgaagaggcggagatccaagcaacc
aatgggaaaaagatcgttgcaaatttgtcaaaactatatcccaaagatatggaagcagct
gctggtggagttgatgacatgacaaaactttcctatctccatgaaccaggagtgctgcag
aatttggcgatcagatatgagcttaatgaaatctatacatacaccggcaatattctcatt
gctgtcaatcctttccaaagattgtcccatttatatgatccccatatgatgcaacagtat
aagggagcaccgtttggagagttaagtccacatgtttttgctgtggcagatgttgcatac
agggctatgattaatgaaaataagagcaacgccattcttgtgagtggtgagagtggtgct
ggaaaaacagagacaacaaaaatgctgatgaggtatcttgcctatttgggtggccgagct
gcaactgaaggaagaacagtggaacaacaagttcttgaatcaaatccagttcttgaagct
tttggcaatgcaaaaactgtcagaaataataattccagtcggtttggtaagttcgtcgag
attcagtttgataagcatgggagaatatcaggtgctgcgatcaggacttaccttcttgaa
aggtcacgtgtatgccaaatatctgacccagagcgcaattaccactgcttttatctcctt
tgcgcagcacctcaggaggaggttgaaaagtacaaattgggaagtcctaagacttttcac
tatctcaatcaatcaaattgttatgagttggttggagtaagcgatgcccacgaatatttg
gcgacgagaagagcaatggatattgttggcatcagtactcaagaacaggatgctattttt
agggttgttgctgctatccttcatattggcaatattgaattttctaaggggaaagaagtt
gattcctcagtcttgaaagatgaaaaatcaaagtttcatcttgaaacaactgcggaactt
cttatgtgtaatcctggagccctggaagatgcactttgtaagcgtgtcatggtaacacca
gaagaggttataaaaaggagtcttgatccttacaatgctactgttagcagggatggtctg
gcaaagacaatatattctcgcttgtttgactggcttgttgataaaatcaatagttccatt
gggcaagatgctagctctaaatgtcttattggtgtcctggacatctatggttttgagagc
ttcaagtcaaacagttttgagcaattctgtattaattatacaaatgagaagttgcaacaa
catttcaatcagcacgttttcaagatggaacaagaagagtacactaaagaacaaattgat
tggagctacattgagtttgttgataatcaagatgttcttgaccttattgagaagaaacct
gggggtgtgattgcacttcttgatgaggcatgtatgtttcccaagtcaacacatgagacg
tttgcccagaagctttaccaaacttttcaaagacacaaacgttttgtcaaaccaaagcta
tctcgaacggactttacaatctgccactatgctggagaggtgttgtaccagtctgatcaa
ttccttgacaaaaataaagactatgttgtggcagagcaccaggaactactaagtgcttct
aaatgctcattcatctctggattatttccacctctgccagaggagacatctaaatcttcc
aagttctcttccattggagcacgctttaagcaacaacttcaagcccttatggacacattg
aattctacagaaccccattatattagatgcgtgaaaccaaataatgtcctaaaaccagca
atttttgagaatgttaatgtcatgcaacagttgcgttgtggtggtgtacttgaggcaatc
agaattagttgtgctgggtatcctacacgtcgcacgttttatgagtttttgcatcgattt
ggaatacttgcaccagaggcccttgaaggaaatagtaccgatgaaaaggctgcatgcaag
aagattttggaaaagaaggggcttgcgggctttcagatagggaaaacaaaagttttcctg
agagccggtcagatggctgaattagatgctaggaggactgaagtactcagtgctgcagca
aaaacaatccaggggaagatgcggacacatatcatgcggaagaagttcctttccttgagg
aaagcatctgtatgtgttcaggcaatatggagaggaagactggcttgtaaactatatgat
aacatgcgaagggaagcagctgccatcaaagttcagaaaaatcaacgtaggcatcaggca
agaaggtcctacaaactccaatatgcttctgttcttgttgtgcaaactgcattgcgagca
atggcagcaagaaatgagttcagatttaagaagcaatctaaggcagcagttacgattcag
gctcgttataggtgccacagggctcattcctaccataggaagttgaaatgtgctgccatt
gttgcacaatgcagatggaggggaagaattgcaaggaaagaactcaagaaactcaaaatg
gaagcaagagaaacaggtgccctcaaagaagcaaaggacaaacttgaaaagaaagtagaa
gaacttacatggcgtgtacagttagagaaacggctaaggacagacttggaagaagcaaaa
gctcaggagttgtcaaaactgcagagctctatggaagcattgcaagctaaactggaggag
tcaaatacaatgcttatcaaggaacgggaagctgctaagactattgtagaagcacctcct
gtagtgcaggaaactcaggttgtcgtccaagacaccgaaaagattgattccttgacaaca
gaggtgcaagaacttaagaactcattacaatcagagaaacagagagctgaagatttagaa
aagaaacgctctgaagaagaacaagcaaatgaagaaaagcaaaagagactagaagagact
gaaataaaaatgcgccaatttcaggactacctgagaaggctagaggagaaactcgctaat
gtggaatctgaaaataaagtgctccgtcagcaagctgtctcaatggctccaagcaaaatt
ctatctggccgctctaagtccaatttacaaaggagttctgaaaatgttcaagtatcaagc
aatgatccaaaaataattctagagtccaataatacgtcctctccgaaaaaggaatatgac
atcgacgataagccacaaaaatctcttaatgagaagcaacaggaaaatcaagatctatta
attaggtgtattgcacagcatttaggctatgctgggaaccggccagttgctgcttgtatt
atatataaatgccttcttcattggagatcatttgaagtagaacggacaagtgtttttgat
cgcatcattcaaaccataggacatgcaattgagacacaagacaacaatgaagttttagca
tattggctttcaaatgcttcaacactattgctattgcttcaaaggacattaaaggctagt
ggatcaaccggtatggctccacagcgtcgacgatcgtcatctgctacactttttggacga
atgacacagagcttcagaggaactccacaaggtgtaaatctctctctcataaatggaagc
atggttagtggagttgaaacactgaggcaagttgaagccaagtatcccgctttactgttt
aaacaacagcttacagcatatgtggagaagatatatggaatgattcgggataatttgaag
aaagagatttctcccttgcttggtttgtgtattcaggccccaaggacatcaagggcaagc
ttaatgaaaggatcttcacgttcaaacaccaatactgctgcccagcaggctttaattgct
cactggcaagggattgtgaagagcctaggaaatttcttgaacatactgaaagtgaacaat
gttcctcctttcttggtccgaaaagtattcactcaaatattctcatttatcaacgtacaa
ctatttaacagtttgctattgagaagggagtgctgttcattcagtaatggtgaatatgta
aaagcgggattagctgaacttgaacattggtgctatagggctactgatgagtatgcaggt
tcagcttgggatgagcttaaacatattagacaagctattggtttcctggtaattcatcaa
aagccaaaaaaaacactggatgaaataagtcatgacctttgtccggtgcttagcatacaa
caactatacaggattagtactatgtactgggatgacaagtatggaacacatagcgtctcg
ccagaggttatatcaaacatgagagtgttaatgacagaagattccaacaatcctgttagc
aattcatttctgctagatgatgactcaagcataccattctccgtcgatgacatatccaaa
tccatgcaacagattgacatatctgacattgagccacctccattgatacgggagaactca
ggctttgtattcttgttgccaccacctgaatag
DBGET
integrated database retrieval system
