Panicum virgatum (switchgrass): 120712093
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Entry
120712093 CDS
T07260
Name
(RefSeq) exocyst complex component SEC8-like isoform X1
KO
K06111
exocyst complex component 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120712093
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120712093
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Sec8_C
EXOC6_Sec15_N
Vps54_N
Na_trans_cytopl
Motif
Other DBs
NCBI-GeneID:
120712093
NCBI-ProteinID:
XP_039853743
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Position
6K:25149778..25192404
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AA seq
1057 aa
AA seq
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MSRGRRGIFDGLPIPVDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDREGEIQFLK
EQSDLIEDVVDEVVHAYHHGFNKAIQNYSQILRLFSESADSITGLKGEMAEAKKLLGRKN
NHLGQLWYRSLTLRHVLSLLDQVEDVAKVPARIENLMAEKQLYAAVQLHVQSMVMLEREG
LQAVGALQDVRSDLTKLRGVLFYKILEELHGHLYNNGEYSSVTLSMVDNEEVPASTAAGR
VVNSMQPLSRRTRSIKGDNHIDGLVTADGFPKTSSVDGGSSFDGPDDDSSLDMRESDGRT
RKDSKSISREIPIFLSCAAPDEFIDSMIKADAPLNVKYLRTLVQCLSMLGKIAAAGAVIC
QRVRPTIHDVITSKIKAYTEEASKSSTDKAAKRNSDGSHSDGPIPRFQMLKQKTKNGASV
MAAQLVVSPISPAMAPAGDAQRAAGQLLRSIFECLLDILENHIIVGDLLEEKSTSEVDNI
NTPHITYGDPSWNPDSESSQATGGFSVAFSLSVVQSECQQLLCEILRATPEAATADAAIQ
TARLANKDPVKEKRDGSEGLSFAFRITDAATSVPNEGQGWRRNSNVPQEGYGTASVIPDQ
GIFLAASVYRPVFEFMNKIGSMLPQKYSQLGSDGLLAFVNNFLKEHFLPAIFVDYRKCVQ
QAISSPAAFRPRVNATLVYGSSVEHGRPVLQGLLAVDIIAKEVLGWVQLMPNYAIELVEY
VRTFLERTHERCRASYMEAVLEKQSYILLSRNDVESLMRLEPANISLQNSTSQPENNVTD
AEAAEVEIELSDLLLEMCPIKQENLIHDDQKLILLASLSDSLEYLADSVERLGESFVCPT
TSMSRNHSQHSQHSRSSNAIPKGLASLANEYRRLAIDCVRVLRLEMQLEAIYHMQEMTKR
EYIEDQDAEDPDDFIISLTTQIARRDEEMAPYITESKRNYVFGGISSVAANASIKALAQM
KSINLLGVQQICRNSVALEQALAAIPSIDSEAVQQRLDRVRTFYELLNLPFESLLGFIAE
HEYLFSAKEYFSVLKVNVPGREIPMDAERRISQILGH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggccgccgcggcatcttcgatggcctccccattccggtcgacaaatcctac
ctcaaggaaggattgtcgcggatcgacgaggggtgggcggccgcgcggttcgactccctg
ccgcacgttgtgcacatcctaacctccaaggaccgcgagggcgagatccagttcctcaaa
gagcagagcgatctcattgaggacgtcgttgacgaagtcgtgcacgcctaccaccacggc
ttcaacaaagccatccagaattactcccagatcctgcggttattcagtgagtctgcagat
agcattactggactcaagggagagatggcggaggccaagaagctgcttggcaggaagaat
aatcacctcggccagctgtggtaccggtcactcacactacgccatgtcctttcccttttg
gatcaggttgaggatgttgcaaaggtccctgcccgaattgaaaacttaatggcagagaaa
cagctgtatgctgcagtgcaattgcatgtccaatcaatggtgatgctagagcgagaaggc
cttcaagcggtaggtgctcttcaagatgttcgttctgatctaacaaagctgcgaggtgta
ctattctacaaaattttggaagagttgcatggccatttgtataacaatggagaatatagc
tctgtgactttgagcatggttgacaatgaggaagtaccagcttctacagctgctgggcgc
gtagtaaacagcatgcaacctctttcaaggagaactaggtcaattaaaggtgacaatcac
attgatggactggtgactgcagatgggtttccaaaaactagttctgttgatggaggctct
tcatttgatggaccggatgatgatagtagcttagacatgcgtgaaagtgatggacgcact
cgtaaagattcaaaaagtatttctcgtgaaatcccaatttttctttcctgtgctgcacca
gatgagttcattgattcaatgatcaaggcagatgccccccttaatgtgaaatacttgaga
acattggtacaatgtttatcaatgcttggaaagatcgcagctgcaggagctgtgatatgc
caacgagtacgccctacaatccatgatgttatcacttcaaagattaaagcctatactgaa
gaggcttcgaaatccagtacagacaaagctgcaaaaagaaattctgatgggtcgcattca
gatggacccattccccggttccagatgctcaagcagaaaacaaagaatggtgcatctgta
atggcagcacaactagttgtcagtcccatttcgccagctatggcacccgcaggagatgct
cagcgtgcagctggtcaactccttagatcaatatttgaatgtcttttagacatacttgag
aatcatattatcgttggggatcttcttgaagaaaaatcaacatcagaggttgacaacata
aacacacctcatatcacatatggggatccaagctggaatccagactctgaatcttcccaa
gctactggtggttttagtgttgcgttctctctgtcagttgtgcagagtgagtgccagcaa
cttctgtgtgaaattttgcgggcaactccagaagctgctaccgctgatgcagctatccag
acagctaggcttgcaaataaggacccagtgaaggaaaagagggatggatcggaaggtctt
tctttcgcttttcgcattactgatgcagcaacctcagtgccaaatgaaggtcaaggatgg
cgaagaaattcaaatgtgccacaagaagggtatggaacagcaagtgtcatacctgaccaa
ggaattttcctagccgcatcagtttaccgtcctgtctttgagtttatgaacaaaatagga
tcgatgttgcctcagaagtactcgcaacttgggagtgatggcttattggcttttgtaaat
aactttttgaaggagcacttcttgccagcaatatttgtagattaccgaaaatgtgttcag
caggccatatccagcccagcagcatttagaccacgtgtaaatgcaaccttagtatatggt
tcatcggtggaacatgggcgtcctgtgctacaagggcttctagctgttgatataatagct
aaagaggttcttggatgggttcaattaatgccaaactatgcgattgagcttgtagagtat
gtacgcacatttttagaacgtactcatgaaagatgtcgtgcatcatatatggaggctgtc
cttgaaaagcaaagttatattctcctctcaaggaatgatgttgaaagtttaatgcgcctt
gaaccagcaaacatttcattgcaaaactctactagccaacctgaaaacaatgttactgat
gcagaggcagccgaagtagagattgaactaagtgatctcttattagagatgtgtccaata
aaacaggaaaacttgatccatgatgaccagaaactgatcttgttagcttctcttagtgac
tcattggaatatttagctgattcagttgaaaggctcggggaatcatttgtatgtccaacc
acctcaatgagcagaaatcacagccagcatagtcaacattcccgctcatctaatgcaatt
ccaaaaggtcttgcgtctctggctaatgagtacagaagactagctattgattgtgtcaga
gtattgagattggaaatgcaacttgaggcgatatatcacatgcaggaaatgaccaaaaga
gaatacatcgaagatcaagatgctgaagatcctgatgactttattatctcccttacaact
cagatcgcacgtcgggatgaagaaatggctccttacatcacagaatcaaaaaggaattat
gtatttggtggaatttccagtgttgcggctaatgcgtcaataaaggcactcgctcaaatg
aagtcaatcaatttgttaggagtccagcaaatatgcaggaactcggtagcactagaacag
gctcttgcggccataccctcaatagatagtgaagcagtccaacagagattggatcgtgtt
cgaacattctatgagttattaaatttgcctttcgagtctttgcttggattcatcgccgaa
catgaatatttattttctgcaaaggagtactttagtgttctaaaggtcaatgtgcccggt
agagagatacctatggatgctgaacgacgcatctcacagattttgggtcactaa
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