Panicum virgatum (switchgrass): 120712168
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Entry
120712168 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120712168
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120712168
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120712168
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120712168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF639
Motif
Other DBs
NCBI-GeneID:
120712168
NCBI-ProteinID:
XP_039853815
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All DBs
Position
6K:complement(28817600..28823231)
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AA seq
642 aa
AA seq
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MVRPRRILALTMLSPLALYTSRLPAALNPIQMRDFPGEITNHGRGIKADKLNALPLETVF
SLKEPVGIVFSDELGGLSKESTESEGQESPSRKAGEHKSRVLSEVTAAADGIEVLEQVTR
REAQDGGLVSTDSEEQEKTTGSQQQSSSEEILLETMPKQTSDKVVAENSLTARTDGKTKS
FVLPDTRIRNIKDQLIKAKVYLGLGSIRANSQYLKDLRQRIREVQKVLGDASKDTDLPKN
ANEKVKALEQMLIKGRQMQDDCSIVVKKLRAMLHSAEEQLHAHKKQTVLLTQLAAKTLPK
GLHCLPLRLANEYFSLDPDRQQFPNQNKLTNPKLYHYALFSDNILATAVVVNSTVLNAKH
PSDHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVQNTGEFTWLNDSYSPVLKQLGSQSMI
DYYFGTNRANPDSNLKYRNSKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLW
SINMKGKVNGAVETCGESFHRFDRYLNFSNPGIAKNFDPHACGWAFGMNVFDLAEWKRQN
ITQIYHSWQKLNQDRSLWKFGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERA
AVIHYNGNMKPWLEIGLPKFRSYWSKYLDYDQPFLRECNINP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccgaggaggatcctcgccctcacgatgctctcccccctcgcgctctacacc
agccgcctcccggcggcgctcaaccccatccaaatgcgggatttccccggagaaatcacg
aatcatggccgtggcatcaaggcagacaagctgaatgcgcttcctctggaaactgtgttc
tctttgaaagaacctgtcggcatcgtcttctcggatgaactgggcgggttgtcgaaagaa
tcgactgaatctgaggggcaagaatcgccatcgagaaaggcaggggagcacaagagccgc
gtgctctctgaagtcacggcggctgctgatggcatcgaagtgctggagcaagtgacgagg
cgggaggcacaggatggtggcttggtgagtaccgactcagaagagcaggagaaaaccacc
ggatcacagcagcaatcatcttcagaggaaattttactggagactatgcctaaacagaca
tctgacaaggtagttgcggagaactccctaacagctagaacagatggtaaaactaaaagc
tttgttttgcctgatacgcggatccggaatatcaaggatcagttaatcaaggcaaaagtc
taccttggccttggatccattagagcaaattcccagtacctaaaagacttaaggcagagg
atacgagaagtccaaaaggtgcttggtgatgcatctaaggacactgatctaccaaagaat
gcaaatgagaaggttaaagcactggagcagatgctaattaagggcagacagatgcaggat
gattgttctattgttgtcaaaaagcttcgagctatgcttcactcagcagaggagcagctg
catgcacacaagaagcagactgttcttctgacacaacttgcagctaaaacccttcctaaa
ggtcttcactgcctccccctgaggctagctaacgaatacttttcattggatcctgatcgg
cagcagttcccaaaccaaaataaactcaccaacccaaaactgtatcattatgccttgttc
tcggataatatactagcaacagcagttgttgtaaattcaacagtgttaaatgccaagcat
ccttccgatcatgtcttccacatagtaactgacagactgaattatgctccaatgagaatg
tggttcctttctaatcctcctggaaaggcaacaattgaagtacagaacactggggagttt
acatggctaaatgacagctacagtccagtgctcaaacaacttgggtctcagtccatgatt
gattactactttggaacaaatcgtgcaaacccagattcaaatttgaaataccgaaattca
aaatatttgtcaatccttaatcatttgcgattttacttacctgagatttatccaaagctt
gacaagatggtctttcttgatgatgatatagtagtaaagaaggatctgactggcctctgg
tcaatcaatatgaaggggaaggtaaatggtgctgttgagacttgtggagagagcttccat
cgcttcgatcgttacctgaatttctcaaatcctggtattgccaagaattttgacccccat
gcttgtggttgggcttttggaatgaatgtgtttgatctggctgaatggaagaggcagaac
ataacccaaatctatcactcatggcagaagcttaatcaagacagatcgctttggaaattt
ggcactctccctccaggtttgatcacattctggaacaagacattccccctcagccggtcg
tggcatgttcttggtctaggttacaacccccatgtaaacagcagagacattgaacgtgct
gcagtcatacattacaatggcaacatgaagccctggctagagattggcctgcccaagttc
cgaagctactggtcaaagtatctagattatgaccaacctttcctgcgggaatgcaacatc
aatccataa
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