Panicum virgatum (switchgrass): 120712225
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Entry
120712225 CDS
T07260
Name
(RefSeq) amino acid transporter AVT3B-like
KO
K14209
solute carrier family 36 (proton-coupled amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120712225
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120712225
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120712225
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC36: Proton-coupled amino acid transporter
120712225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120712225
NCBI-ProteinID:
XP_039853907
LinkDB
All DBs
Position
1K:45655333..45657273
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AA seq
425 aa
AA seq
DB search
MGFGMGNDGASSSSSRLDPAPLLPHHGSAGGEIGLSSQPKTFANVFIAVVGAGVLGLPYT
FSHTGWAAGSLLLFAVAVLTFYCMMLLVACRRRLADERPKIASFGDLGDAVFGAHGRFAV
DVMLVLSQASFCIGYLIFISNTMAHLYPIFAPSSSALLSPKALFIWAMLPFQLGLNSIKT
LTLLAPLSIFADVVDLGAMGVVLGQDVAAWLAMPPPVVAFGGPAALLYGLGVSVYAFEGV
GMVLPLEAEAANKRKFGVTLGLSMAFIAVMYGLFGVMGYVAFGDATRDIITTNLGAGWLS
AAVQLGLCINLFFTMPVMMNPVYEVAERLLHGKRYCWWLRWLLVVVVGLAAMYVPNFTDF
LALVGSSVCVLLGFVLPASFHLKVFGAEMAWPGVLSDALLVVLGLALAVFGTYTSLLQIF
HSSSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgggatggggaatgacggggcgagctcgtcgtcgtcgcggctggaccccgcg
ccgctcctgccgcaccacggcagcgcgggcggcgagatcggcctgtcgtcgcagcccaag
acgttcgccaacgtcttcatcgcggtggtcggcgccggcgtgctggggctgccgtacacc
ttctcgcacaccgggtgggcggcggggtcgctgctgctcttcgccgtcgccgtgctcacc
ttctactgcatgatgctgctcgtggcctgccgccgccgcctcgccgacgagcgcccgaag
atcgcctcgttcggggacctcggggacgccgtgttcggcgcgcacgggcggttcgccgtc
gacgtcatgctggtgctcagccaagcgagcttctgcatcgggtacctcatcttcatctcc
aacaccatggcgcacctctacccgatattcgcgccgtcgtcctccgccctcctctccccc
aaggcgctcttcatctgggcgatgctgccgttccagctcgggctcaattccattaagacg
ctcacgctgctcgcgccgctcagcatcttcgccgacgtcgtcgacctcggcgccatgggg
gttgtccttggccaggacgtcgccgcctggctcgccatgcccccacccgtggtcgcgttc
ggcggcccggccgcgctcctctacgggctcggcgtctccgtgtacgcgttcgagggagtc
ggcatggtgctgccgctggaggcggaggcggcgaacaagaggaagttcggcgtcacgctc
gggctgtccatggcgttcatcgccgtcatgtacgggctgttcggcgtgatggggtacgtc
gcgttcggcgacgccacgcgggacatcatcaccaccaacctcggcgccgggtggctgtcg
gccgccgtgcagctggggctctgcatcaacctcttcttcacgatgccagtgatgatgaac
cccgtgtacgaggtcgccgagcgcctcctccacggcaagcgctactgctggtggctccgc
tggctgctcgtcgtcgtcgtcgggctcgccgccatgtacgtgcccaacttcaccgacttc
ctggcgctcgtcggaagcagcgtctgcgtcctcctcgggttcgtgctgccggcctcgttc
cacctcaaggtgttcggcgccgagatggcctggcccggggtgctctccgacgccctcctg
gtcgtgctcggcctcgcgctcgccgtgttcgggacgtacacgtcgctgctgcaaatcttc
cactcgtccagcgcttga
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