Panicum virgatum (switchgrass): 120712316
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Entry
120712316 CDS
T07260
Name
(RefSeq) probable N6-adenosine-methyltransferase MT-A70-like
KO
K05925
mRNA m6A methyltransferase catalytic subunit [EC:
2.1.1.348
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120712316
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.348 mRNA m6A methyltransferase
120712316
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120712316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MT-A70
Macro
Motif
Other DBs
NCBI-GeneID:
120712316
NCBI-ProteinID:
XP_039854014
LinkDB
All DBs
Position
1K:45755544..45759783
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AA seq
706 aa
AA seq
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MEAQTGAAPGGGDDLATMREQCRALEESIAARREAQLDLIGSLQHLVTDLVPSLDQSLRL
IAAFNGRPFVPTLYPNASAHAQSHNLKPHHRRALPDPARSTRRKTSPGSSPAPAAAGGSG
AVGGIDAVRTMVAVCLLELVPFSEIDAAALARRLQAETSSASEAERAALADLATELGGSA
PAAVALALRRISEDSGALQIEEAFIGGKQMTIVWAIDRSKLLKELPESASVPQVQPPPTP
QAPPTETDANSAIIPRPPPLQQPEMWGHPMQPMFPRPRGMAMPRMPPGLMPLQRPFMAPG
AVMPMGGGPGLSPTQMKQRTEEEDLKDLELLLNKKTYREKQNTKTGEELLDLIHRPTAKE
TAVAAKFKTKGGSQLKEYCTNLTKEDCRRQTGSFVACDKVHFRRIIAPHTDTNLGDCSFL
DTCRHTKTCKYVHYELDQTPDVPPMMAGALAPPRQIKPQRAEYCSEIELGESQWINCDIR
NFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAMEL
GRECLELWGYMRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPLVNRNIDT
DVIVAEVRETSRKPDEMYAMLERISPRTRKLELFARMHNTQAGWLSLGNQLNGVRLVDEG
LRARYKAAYPDVEVQLPSPPRTSGPMDAEQTSSQKAAAPDGGERPS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcagaccggcgccgcccccggcggcggcgacgacctcgcaaccatgcgcgag
cagtgccgagccctggaggagtccatcgccgcccgccgggaggcgcagctcgacctcatc
ggctccctgcagcacctcgtcacggacctggtgccgtccctcgaccaatccctccgcctc
atcgccgccttcaacggccgccctttcgtccccacgctctaccccaacgccagtgcccac
gcgcagagccacaacctcaagccccaccaccgccgcgccctccccgacccggcccgctcc
acccgccgcaagacctcgccgggctcctccccggcccctgccgccgcggggggctcgggc
gccgttggcggcatcgacgctgtgcgcaccatggttgccgtgtgcctcctcgagctcgtc
cccttctccgagatcgacgccgccgcgctcgcgcgccgcctgcaggcggagacgtcgtcc
gccagcgaggccgagcgggcggcccttgccgacctcgccacggagcttggaggttccgcg
cctgctgcggttgccctcgcgctccgtcgcatctcggaggacagcggcgccttgcagatc
gaggaggccttcattggaggaaagcagatgacaattgtctgggccattgaccggagcaaa
ctcctcaaagagctacctgaatccgcctccgtgccccaagtccaacctccgccaactcca
caggcgcccccgaccgagactgatgctaacagcgccatcataccgaggcctccgccgctg
cagcagccggagatgtggggtcacccaatgcaaccgatgttcccacgccccaggggcatg
gcaatgccgaggatgccgccagggttgatgccactgcagcggccattcatggcgccaggg
gcagttatgccaatgggtggtggcccggggctgagccctactcagatgaagcagaggaca
gaggaggaggaccttaaggaccttgagctgctgctgaacaagaagacatatagagagaag
cagaatacgaaaactggagaggagctgctggatctcattcaccggcctacggcaaaggag
acggctgtcgcggcaaagtttaaaacaaagggtggctcccagctaaaggaatactgcacc
aatttaactaaggaagattgccgacgccaaacaggttcctttgtcgcctgtgataaggtc
cactttcggcgtattattgctccacatactgatacaaacctaggagattgctctttcctg
gacacatgtcgtcacacaaagacttgcaagtatgtccactacgaacttgatcaaacacca
gatgtacctccaatgatggctggtgccctcgcaccacctaggcaaataaagccccagaga
gctgaatattgttcagaaatagagctaggagaatctcaatggataaactgtgacatccgg
aacttcaggatggacatcttaggacagtttggagtaattatggctgatcccccctgggat
attcatatggagctgccatatggcacaatggctgatgatgaaatgaggacacttaatgtt
ccagctttgcaaactgatggtttgattttcttatgggtgactggtcgtgctatggaactt
gggcgtgaatgtctggagctctggggttacatgcgtgttgaagaaattatctgggtgaag
accaatcaacttcaacgtatcatccgaactggccgcactggccattggttgaatcacagc
aaagagcattgtcttgttggaataaaaggaaaccctttagtgaacaggaatatagatact
gatgttattgttgccgaagtccgtgagactagcagaaaacctgatgagatgtacgccatg
ctagagcggataagcccgaggacaaggaagctggaactgtttgcaagaatgcataataca
caagctggatggctttctctgggtaaccagttaaatggagtaaggcttgtggatgaaggg
ttgagagcaaggtacaaggctgcttaccctgatgtggaggtccagctgccatcacctccc
aggacgagcgggccaatggatgctgagcaaactagttcacagaaagctgctgcaccagat
ggcggtgagaggccttcctga
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