Panicum virgatum (switchgrass): 120712387
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Entry
120712387 CDS
T07260
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform X1
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120712387
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Others
120712387
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GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_2
Intu_longin_3
Motif
Other DBs
NCBI-GeneID:
120712387
NCBI-ProteinID:
XP_039854087
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Position
6K:36096968..36104998
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AA seq
513 aa
AA seq
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MGLSAGAAGDGAQLCVFDLRRGQQEGQELDKILFFHPADCPILLQLSVIGLCEGIVTFTR
IFSPEEDCEVIESEKRSHVFYQAEPDIWMVLVVEKTKDNESTWRCGALQGILKEAHSLFT
MFHGPIRSLLDRQPSAELARGHLRTFLTDYLSDFYVGKKLQFPTYRDSLKERGTIQMLTV
PREVALEVQSLTTVLGSCLGNVTCQSLVLFEDLLVSTTLPPDDTLNLYTYAVLRLTPRAL
SSNASSWSYLRKGTYVSAGLTSSSSNGTTAGERYHSRSRDTSPDGQNQMHHNFRPLLREK
LSKGKDGFVAADFAATEVRGVVPLTPILWFQQAEERMYLCIYQHKSLTILLLIPASSLIN
GEEGIAHVKKQMLENASQKIVTVEQKLTRRWGGENAYHVSGYRYLLVDPDRRVSRASPSG
KVTTLAKDSLLALNRLRQEVDLKKSRFRRSDPCHDKDFEVCIRTKNNAWVIAKITRGREL
YMALEKGGETLLYASTAVEKFSNRYCEGAFSTD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggactctcggcgggcgccgcgggcgacggcgcgcagctctgcgtcttcgacctccgg
agggggcagcaggagggccaggagctcgacaagatcctcttcttccaccccgccgactgc
cccatcctgctccagctctccgtcatcgggctctgcgaggggatcgtcactttcacgaga
atattttctcctgaagaggattgtgaagttatagaatctgagaaacgctcccatgttttt
tatcaagcggagcctgatatttggatggttctggttgtggaaaaaaccaaggacaatgaa
tcaacttggcgttgtggtgcactgcaagggatacttaaagaggcccattcgcttttcaca
atgttccatggaccaatccgatctttacttgacagacaacccagtgcagaacttgcccgt
ggtcacctccgcacatttctcacagattatttgagtgatttttatgttggtaaaaagtta
cagttcccaacctaccgtgacagcctaaaggagaggggaacaatccaaatgctcacagta
ccaagggaagtagcacttgaagttcagtcactcaccacagttcttggatcatgtcttgga
aatgtcacctgccaatcacttgtattatttgaagacctattggtgtctacaacactgcct
ccggatgatactttaaacctatatacctatgctgtcctgaggttaactcctcgtgcctta
tcttccaatgcaagctcttggtcttacttgcggaaaggaacttatgttagtgcaggcctt
acttcaagttcatcaaatggaacaactgcaggagaaaggtaccatagtcgatctcgtgat
acttctcccgatggacaaaatcagatgcatcataatttcaggcctctcctgcgtgagaaa
ttgtcaaagggaaaggacggttttgttgctgctgatttcgcagctacagaagttcgtggt
gttgtacccttgactccgatactctggttccagcaggcagaggagcgcatgtacctatgc
atttatcagcacaagagtctcactatccttttgctaattcctgcttcctcactaataaat
ggagaagagggcatcgctcatgtgaagaagcagatgcttgaaaatgcatcacagaagatt
gtcactgttgaacagaaactgacacgcagatggggaggagaaaatgcttatcatgttagt
ggatatcgttacttgctggttgatccggacaggagggtatcaagagcctccccgtctggg
aaagtcactaccctggcaaaggattcgctacttgccctcaataggctaagacaagaagta
gatttaaagaagtcaagattcaggagaagtgacccctgtcatgataaggattttgaagta
tgcatcagaacaaaaaacaatgcatgggtgattgctaaaattactcgaggaagggagctt
tacatggctttagagaaaggtggtgaaacacttctttatgcatccacagctgtagagaag
tttagcaacaggtactgtgagggagcattctctacggactga
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