Panicum virgatum (switchgrass): 120712394
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Entry
120712394 CDS
T07260
Name
(RefSeq) protein TIFY 6a-like
KO
K13464
jasmonate ZIM domain-containing protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120712394
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GFIT
Motif
Pfam:
tify
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120712394
NCBI-ProteinID:
XP_039854099
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Position
6K:complement(36184450..36187603)
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AA seq
440 aa
AA seq
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MERDFLGAIGRAGTCGGGGAVKEGRAESDNPPAATQWQFPATSGAAPAFMSFRTAREEGN
KEFSISGFRPAAATGDAFDGIKKQASLPVMPQQRQFGLNNQVTALQYPAAPHGQRVQGMD
YKVAARHHLPAGKRMVQPVSVRHPGPFNQANPMLRSQSFHNGTVGPFKTQPFTMSNGFGG
STVGMYGSRNPRSQTSTQLTIFYNGSVNVFDNVPVEKAKELMMLASRASIPSPPSAPHKP
DSPISAPAKVNVPEVLPARQMVIQKPEPSVPHTTSSPIPVVPQVVTLSMNTSNRTIEPMR
PKPAVQMPVTAPTIQAMPVTAPTIQAMPVSAPTSQAPSSQPMPLATTSAAVPRAVPQARK
ASLARFLEKRKERVISVEPYPTSKSPLQSSDTIGSPRAPTKSSSTEIAMTSSNGEGPLLF
GQSRNISFSTEACPSTKLHI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagagggatttcctgggcgcgattggccgggcggggacgtgcggcggcggcggcgcg
gtgaaggagggccgggcggagtcagataacccgccggcggcgacgcagtggcagttcccg
gcgacgtccggcgcggcgccggcgttcatgtctttccggacggccagggaggagggcaac
aaagagttctccatctccggcttccgcccggcggcggcaaccggagacgccttcgacggc
atcaagaagcaggcctccttgcccgttatgcctcagcagaggcaattcgggctcaacaac
caggtcacggcgctgcagtatcccgctgcgccccacggccagcgcgtgcaggggatggat
tacaaagtggcagcgcgtcatcacctccctgctggaaaaaggatggttcagccggtctcg
gtgcggcatcctgggccgttcaaccaggcgaatccgatgctcaggtcgcagagcttccac
aacggcactgttgggccattcaagactcagcctttcaccatgagcaatgggttcggcggt
tctacggttggcatgtatggctcaaggaacccgcgtagtcagacctcaacgcagttgaca
atattctacaatggttctgtaaatgtattcgataacgtccccgtggagaaggctaaagaa
cttatgatgttagccagcagggcatctattccaagcccaccaagcgcaccccacaaaccg
gattcacctatttctgcccctgcaaaggtcaatgtgcctgaggttttgcctgctaggcag
atggtaattcagaaaccagagccgtccgtgcctcataccacttcaagtccaattcccgtt
gtcccacaagttgtgactctctccatgaatacatccaaccgtaccatagaacccatgagg
ccaaaacctgctgttcaaatgccggtcactgctcctaccattcaggcaatgccggtcact
gctccaaccattcaggcaatgccggtctctgctcctaccagtcaggcaccctcgtctcag
ccaatgccgctggcaactacaagtgctgctgtgccaagagctgtccctcaagctcggaaa
gcatctctcgcccgattcttggagaagcgaaaggagagagtgattagtgtcgagccatac
ccgacatcgaagagcccgctacaaagcagcgacaccatcggcagccctcgcgctcccacc
aaatcgtcgtctacagagatcgccatgacgagcagcaacggggaggggcccttgctcttc
ggccagtccaggaacatcagcttcagcaccgaggcctgccctagcacgaagttgcatatc
tga
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