Panicum virgatum (switchgrass): 120712437
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Entry
120712437 CDS
T07260
Name
(RefSeq) transcription factor MYB106-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120712437
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120712437
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
120712437
NCBI-ProteinID:
XP_039854148
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Position
6K:36915767..36917986
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AA seq
408 aa
AA seq
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MIRHGKFSVIPPIMLMIYSSSSARCLLILLYLSSSRALSCQLDFTTITHHTALMGRSPCC
EKIGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPAKAGLQRCGKSCRLRWTNYLRPDIKR
GKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHK
SISGTLTSTTDDKSAKAAASLSHMAQWESARLEAEARLARESKMRIAAPTPTSLHSQQTN
VAASTASPCLDVLHAWQVAKIDLDSPTSTLTFTGSNSGMLPTPRTNRLEVSESNSAMWQS
NELEGDESDWQFFSKHQQVLGLEGKEKEEDFIGCEEVWFTGMAGVGAGFTGMMLDGSNEH
DASECWGESSNGQTEHSNQASDGDDKNYWNGVLGMVNSELPPQSPPLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgataagacatggaaaattcagtgtcatacctcctatcatgctaatgatttatagcagt
agcagtgcgcgttgtcttctcatcctgctctatttatcctccagccgggcactcagttgt
cagcttgacttcacaacgataacacaccacactgctttaatggggcgatcaccatgctgt
gagaagattggcctgaagaaaggtccatggacgccagaggaggatcagaagctgcttgcc
tacattgaggagcacgggcatgggagctggcgatcactgcctgcgaaggcaggcttgcag
aggtgcgggaagagctgcagattgaggtggacaaactacctgaggccggacatcaagagg
ggcaagttcagcttgcaggaagagcagaccatcatccagcttcatgcccttcttggtaac
agatggtcggccattgcaacacatctaccaaagcgcacagacaatgagatcaagaattac
tggaacacacacctcaagaagaggctggccaagatggggatcgaccctgtcacccacaaa
tccatcagtggcactctcaccagcaccacagatgacaaatcagctaaggcagcggcaagc
ctcagccacatggctcagtgggagagtgcccgcctcgaggctgaggcacggctggctcga
gaatcgaagatgcgaatagcagcaccgacaccaacctcactccattcgcagcaaacgaat
gtcgctgcctccactgcttctccatgccttgatgtgttgcatgcatggcaggttgcaaag
atagacctggattcacctacctccacactgacgtttacagggagcaatagtggcatgctg
ccaacccccaggaccaacagactagaggtatcggaaagcaactctgcaatgtggcagagt
aatgagctcgagggtgacgagagcgattggcagttcttcagcaagcaccagcaagtgctg
ggactggaaggcaaggagaaggaagaggatttcatcggctgtgaggaggtgtggttcact
ggaatggctggggttggagctggcttcacgggcatgatgcttgatggatccaatgagcat
gacgcatcagaatgctggggtgagtccagcaatggccaaactgagcacagcaaccaagca
tcagatggggatgacaagaattattggaatggcgtcctcgggatggtgaactcagagctg
ccaccccagtcacccccattggtctag
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