Panicum virgatum (switchgrass): 120712449
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Entry
120712449 CDS
T07260
Name
(RefSeq) ribonuclease 1-like
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120712449
Enzymes [BR:
pvir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
120712449
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120712449
Prokaryotic type
120712449
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
120712449
NCBI-ProteinID:
XP_039854166
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All DBs
Position
6K:complement(37051239..37052720)
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AA seq
226 aa
AA seq
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MAARLPLAILMLALAVAGRAAAQDYDFFYLVLQWPGSYCDTKQSCCYPSSGKPAADFGIH
GLWPNRDDGSYPQNCNPDAAFNPSKVSDLLSSLRAKWPTLACPTNDGLRFWGHEWEKHGT
CAADVFDEHGYFQAALRLRDQLGVLGALTAGGVNPDGGYYTLAQIKGAIREGTGFEPYVE
CNRDEAGNSQLYQLYFCVSAAGDSLVDCPVLPRGRPCGSRIEFPAF
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggctgcccctggcgatcctgatgctggccctggccgtcgccgggcgcgcg
gcggcgcaggactacgacttcttctacctcgtgctgcagtggcccgggtcctactgcgac
accaagcagagctgctgctacccctcgtccggcaagccggcggccgacttcggcatccac
ggcctctggcccaaccgcgacgacggctcctacccgcagaactgcaaccccgacgccgcc
ttcaacccctccaaggtgagcgacctgctgagcagcctgcgcgccaagtggccgacgctg
gcgtgcccgaccaacgacgggctccgcttctggggccacgagtgggagaagcacggcacc
tgcgccgccgacgtcttcgacgagcacggctacttccaggcggcgctccgcctccgcgac
cagctcggcgttctcggcgcgctcaccgccggcggcgttaaccccgacggcggctactac
acgctggcccagatcaagggcgccatccgcgagggcaccggcttcgagccctacgtcgag
tgcaaccgcgacgaggccggcaacagccagctctaccagctctacttctgcgtcagcgcc
gccggcgacagcctcgtcgactgccccgtcctcccccgcggccggccctgtggcagcagg
atcgagttcccggccttctag
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