Panicum virgatum (switchgrass): 120712474
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Entry
120712474 CDS
T07260
Name
(RefSeq) Golgi SNAP receptor complex member 1-1-like
KO
K08495
golgi SNAP receptor complex member 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120712474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120712474
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
120712474
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Not3
NET2A_C
Sec20
4HB_MCP_1
COG5_N
Tektin
DUF1759
DUF5344
Motif
Other DBs
NCBI-GeneID:
120712474
NCBI-ProteinID:
XP_039854194
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All DBs
Position
6K:complement(37317044..37320089)
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AA seq
218 aa
AA seq
DB search
MEASSWDALRKQARKLEAQLDDQLNAYRKLASMKSDDSENHVESDIERSLKQLQQVNSQM
QAWVSSGGSELLSHTLTRHMEILQDLSQEFFRLRSSLRAKQQHASLLDFRDFDRASFDVE
EAADSSDQSLLKEQAAITRSTGQMDNVISQAHTALGALMSQRSTFGGITTKISSVGNRLP
MINQILSSIRRKKSMDTIILSLVASVCAFLIFIYWLSK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcttcgtgggacgctctccgcaagcaggcaaggaagctagaagctcagtta
gacgaccaactgaacgcataccggaaattggcttctatgaaatccgatgattcagagaat
cacgtcgagtctgatatagaaagatcactgaagcaacttcagcaagtaaattctcagatg
caggcctgggtatcatcaggaggctcagaactcctttctcacaccttgactcgacatatg
gagattttgcaggatctttcacaggaattcttccgcctccgatcaagtctcagagcaaag
cagcaacatgcttccctccttgattttagagattttgacagagcaagctttgatgttgaa
gaggctgcagattcctccgatcaatctctcctaaaagaacaagcagcaatcacccgaagt
actggacagatggataatgtgatatcgcaagctcacacagccctaggtgcccttatgtca
caacgatcgacattcggtggaatcactacaaaaattagcagcgttggcaatcggctccct
atgatcaatcagatcctgtcatcaatcagaaggaagaaatcgatggacacaattattctt
tcattagttgcctctgtttgtgcatttcttattttcatctactggttgtcaaaatag
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