Panicum virgatum (switchgrass): 120712510
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Entry
120712510 CDS
T07260
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120712510
00270 Cysteine and methionine metabolism
120712510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120712510
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
120712510
1.1.1.399 2-oxoglutarate reductase
120712510
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120712510
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
KARI_N
AdoHcyase_NAD
ACT_AHAS_ss
UDPG_MGDP_dh_C
XdhC_C
ELFV_dehydrog
TrkA_N
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
120712510
NCBI-ProteinID:
XP_039854245
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Position
6K:complement(38114532..38120180)
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AA seq
625 aa
AA seq
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MAASRALLPTPHAAAAAAASPAGARARRLAAASSASASLPSAARLLRVRCATLSSPAPVA
AAEAPARRISRAGSDGALRPKPAVLVAEKLSEAGLAVLREFADVECAYGMAPAELLARVP
QFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVA
AAEHGIALLASMARNVSQADAALKAGKWQRSKYVGVSLVGKTLAIMGFGKVGSEVARRAK
GLGMHVIAHDPYAPADRARAIGVELVSFDEAIARADFISLHMPLIPTTSKIFNDESFAKM
KTGVRIINVARGGVIDEDALVRALDSGKVAQAALDVFTVEPPPKDSKLVLHENVTVTPHL
GASTVEAQEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLSELAPYVSLAEKLGRLAV
QLVAGESGIKGVKVVYTTARGPDDLDDTRLLRAMVTKGLVEPVSSTFVNLVNADYTAKQR
GLRITEERVAHDSPAAEAPLESIQVRLSQVQSKFAGAISDGGDIVLEGRVKYGVPHLTLV
GPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQRNVNISFMSVGRTFRGKQAIMAIGVD
EEPDKETLEKIGGIPAIEEFVFLEL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcgcgcgcgctgctccccaccccgcacgcggccgccgccgcggccgcgagc
cccgcgggggcgcgggcacgccgactcgccgccgcctcctcggcctcggcctcgcttccg
tccgcggcgcggctgctccgcgtccggtgcgcgacgctgtcgtcgccagcgcccgtggcg
gcggcggaggcgccggcgcgccggatctcgcgggccgggtcggacggggcgctgcggccc
aagcccgcggtgctggtggccgagaagctgagcgaggccgggctggcggtgctgcgggag
ttcgcggacgtagagtgcgcgtacggcatggcccccgcggagctcctcgccagggtgccc
cagttcgacgcgctcatcgtgcgcagcggcaccaaggtgacgcgggaggtgctggaggcc
gggcgcgggcggctgcgggtcgtgggccgcgcgggcgtcgggatcgacaacgtcgacctc
caggccgccaccgaggccggctgcctcgtcgtcaacgcgcccaccgccaacaccgtcgcc
gccgcggagcacggcatcgcgctgctcgcgtccatggcgcgcaacgtctcgcaggccgac
gccgcgctcaaggccggtaaatggcaaagaagcaagtacgtgggggtttccctagttggg
aagactcttgccatcatgggattcggtaaggttggttcagaggtagcacgccgagcgaaa
gggctcggtatgcatgtgatcgcccatgatccctatgcccctgccgatcgggcgcgtgcc
atcggagtagagctggtttctttcgacgaggccatagcaagagccgatttcatctccctc
cacatgccactgataccgacaacatccaagatcttcaatgacgagtcctttgccaagatg
aagactggtgttcggatcatcaatgtggccaggggcggagtgatcgatgaagatgctcta
gtgagggcccttgattcaggcaaagttgcgcaggcggctcttgatgtcttcaccgtggag
cccccacctaaggacagcaagctggtgttgcatgagaacgtgactgtaacaccccacctt
ggagcaagtactgtggaggcccaggaaggagtcgctatcgagatcgcggaagctgtggtt
ggtgcactgaagggcgagctcgcagcgacagccgtgaatgcgcccatggtcccagctgag
gttctgtcagagctcgctccttacgtttcgctggcagagaagctcggcaggctggctgtg
cagctcgtcgccggcgagagcggcatcaagggcgtgaaggtggtgtacaccacagcccgc
ggccccgacgacctggacgacacgaggctcctccgcgcgatggtgaccaagggcctggtg
gagcccgtgtccagcacgttcgtgaacctggtgaacgcggactacaccgcgaagcagcgc
ggcctccgcatcacggaggagcgcgtcgcgcacgacagcccggccgccgaggcgccgctg
gagtcgatccaggtccggctctcgcaggtgcagtccaagttcgccggcgccatcagcgac
ggcggggacatcgtgctggagggccgggtcaagtacggcgtgccccacctcaccctcgtg
ggcccctacgaggtggacgtcagcctggagggaaatctgatcctgtgccgtcagatcgac
cagcccgggatgatcggcaaggtcggcaacatcctcggccagaggaacgtgaacatcagc
ttcatgagcgtcggccggacgttccgcggcaagcaggccatcatggccatcggcgtcgac
gaggagcccgacaaggagacgctggagaagatcggcggcatcccagcgatcgaggagttc
gttttcctcgagctatga
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