Panicum virgatum (switchgrass): 120712664
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Entry
120712664 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 27-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120712664
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120712664
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120712664
NCBI-ProteinID:
XP_039854440
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Position
6K:40710414..40714658
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AA seq
486 aa
AA seq
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MEEEAARAPLLQPQPRGEAAGGGTKAGRARRAAAEWWVESKKLWRIVAPAIFQRIALYAI
NVVTQAFIGHLGDLELAAFSIAATVVAGFNFGFLLGMASALETLCGQAFGAKKYHMLGVY
LQRSWIVLLIFAAALTPTYIFMEDLLLLIGQSPELSRLAGQMSVWLLPQHFAMAMLLPLT
RFLQSQLKNWVTAATAGAALAVHVAVTYVLVQHLQLGIVGAVAAADMSWWLVVLGQFVYV
VGGGCPLSWKGFSMEAFADFWEFIKLSLASGVMLCLENWYFRLLVLLTGYLKNAEIAVDA
LSICQTINGWELMIPFGFLAATGVRVANELGAGSGRGARFAIIVSITTSAVIALFFWCLI
LYFNGEIALLFTSSEVVLAAVHDLSVLLAFTILINSVQPVLSGVAVGSGWQALVAYVNVG
SYYLIGVPLGILLGWPLHFGVGGIWSGMIGGTAVQTAILAYLTIKCDWDEEARIASMRMQ
KWAESK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcggcgcgggcgccgctgctgcagccgcagccgcgcggcgaggcggcg
gggggcggcaccaaggcggggcgcgcgaggcgggcggcggcggagtggtgggtggagtcg
aagaagctgtggcgcatcgtggcgccggccatcttccagcggatcgcgctgtacgcgatc
aacgtcgtcacgcaggccttcatcggccacctcggcgacctcgagctcgccgccttctcc
atcgccgccaccgtcgtcgccggcttcaacttcggattcctgctgggcatggcgagcgcg
ctggagacgctgtgcgggcaggcgttcggtgccaagaagtaccacatgctgggggtgtac
ctgcagcgctcgtggatcgtgctgctcatcttcgccgcggcgctgacgccgacctacatc
ttcatggaggacctgctgctgctgatcgggcagtcgccggagctgtcgcgcctggcgggg
cagatgagcgtgtggctgctcccgcagcacttcgccatggcgatgctgctcccgctcacg
cggttcctgcagagccagctcaagaactgggtcaccgcggccaccgcgggcgccgcgctc
gccgtccacgtcgccgtcacctacgtgctcgtgcagcacctccagctcgggatcgtcggg
gccgtcgccgccgccgacatgtcgtggtggctcgtcgtgctggggcagttcgtctacgtc
gtcggaggggggtgcccgctgtcgtggaagggcttctcgatggaggccttcgccgacttc
tgggagttcatcaagctctccttggcctccggagtgatgctctgcttagagaactggtac
ttcagattgctggtgttactgacagggtacctgaagaacgccgaaatcgctgtggatgca
ctctccatatgtcagacgatcaacggatgggagctgatgattccgttcggcttcttagca
gcaacaggggtgcgagtggcaaacgagctcggcgccgggagcggcagaggcgcgcgcttc
gccatcatcgtctccatcacgacgtccgcggtgatcgccctcttcttctggtgcctgatc
ctctacttcaacggcgagatcgcgctcctcttcacgtccagcgaggtcgtgctcgccgcc
gtgcacgacctctccgtgctgctcgccttcaccatcctcatcaacagcgtgcagcccgtc
ctctcaggggtggccgtcggttcaggatggcaagccttggtcgcctacgtgaacgtcggt
agctactacctgatcggagtccccttgggcatcttgctcggttggccgctgcatttcgga
gtcgggggaatctggtcggggatgattggcgggaccgccgtccaaacagcgatcctggcc
taccttaccatcaaatgtgactgggatgaagaggcgaggatagccagtatgagaatgcag
aaatgggccgagtcaaaataa
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