Panicum virgatum (switchgrass): 120712665
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Entry
120712665 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 27-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120712665
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120712665
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120712665
NCBI-ProteinID:
XP_039854441
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Position
6K:40716234..40731728
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AA seq
472 aa
AA seq
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MEAPAAGAPLLQPRGGEVTAEWWAESKKLWRIVGPAIFQRIALYGINVVSQAFIGHLGDL
ELAAFSIAATVVAGFNFGFLLGMASALETLCGQAFGAKKYHMLGVYLQRSWIALLLFAVA
LTPTYILMEDLLLAIGQSPELARLAGKLSVWLIPQHFAVAMLVPLTRFLQSQLKNWVTAA
TAGVTLAVHVAATYLLVQRFQLGIVGAVVAADLSWWLVVLGQLLYVVGGGCPLSWKGFST
EAFADFWEFVKLSSASGVMLCLENWYYRVLILLTGYLKNAEIAVDALSICLTINGWEMMI
PLGFLAATGVRVANELGAGSGKGARFAIVVSITTSVLIGLFFWCVILYFNDRIALLFTSS
EVVLAAVHDLSVLLAFTILLNSVQPVLSGVAVGSGWQALVAYVNIGSYYLVGVPLGVVLG
WPLRFGVGGIWSGLIGGTAVQTLVLAYLTARCDWDEEAKKASTRMRVWASSK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggcggcgggggcgccgctgctgcagccgcgcggcggcgaggtgacggcg
gagtggtgggcggagtcgaagaagctgtggcgcatcgtggggccggccatcttccagcgg
atcgcgctgtacgggatcaacgtcgtctcgcaagccttcatcggccacctcggcgacctc
gagctcgccgccttctccatcgccgccaccgtcgtcgccggcttcaacttcggattcctg
ctgggcatggcgagcgccctggagacgctgtgcgggcaagccttcggcgccaagaagtac
cacatgctgggcgtgtacctgcagcgctcgtggatcgcgctgctcctcttcgccgtggcg
ctgacgccgacctacatcctcatggaggacctgctgctggcgatcgggcagtcccccgag
ctggcgcgcctcgccggcaagctcagcgtctggctgatcccgcagcacttcgccgtggcg
atgctggtcccgctcacccggttcctgcagagccagctcaagaactgggtcaccgcggcc
accgccggcgtcacgctcgccgtccacgtcgccgcgacctacctgctcgtgcagcgcttc
cagctcgggatcgtcggggcggtcgtcgccgcggacctgtcgtggtggctcgtcgtgctg
ggtcagctcctgtacgtcgtcggcggcgggtgcccgctgtcgtggaaggggttctcgacg
gaggcgttcgccgacttctgggagttcgttaagctctcctcggcctccggagtgatgctc
tgcttggagaactggtactacagagtgttgatattgctgacagggtacctgaagaacgct
gaaatcgctgtcgacgcactctccatatgcctgacgattaacggatgggagatgatgatc
ccattaggcttcctggctgcaacaggcgtgcgggtggcgaacgagctcggcgccgggagc
ggcaagggcgcgcgcttcgccatcgtcgtctccatcacgacctccgtgctgatcggcctc
ttcttctggtgcgtgatcctctacttcaacgaccggatcgcgctcctcttcacgtccagc
gaggtcgtgctcgccgccgtgcacgacctctccgtgctgctcgccttcaccatcctcctc
aacagcgtgcagcccgtcctgtcaggggtggctgtcggttcaggatggcaagcgttggtt
gcctacgtgaacatcggaagctactacttggtcggagtccccctcggcgtcgtgctcggt
tggccgttgcgttttggagttgggggaatctggtctgggttgattggcggaaccgccgtt
cagacgctggtactggcctatctcactgccagatgcgattgggatgaagaggcaaagaaa
gcaagtacacgaatgcgagtatgggccagctcaaaatga
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